Scyliorhinus torazame (cloudy catshark): 140399249
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Entry
140399249 CDS
T11303
Symbol
srp54
Name
(RefSeq) signal recognition particle subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03060
Protein export
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
140399249 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
stoz02044
]
140399249 (srp54)
Enzymes [BR:
stoz01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
140399249 (srp54)
Secretion system [BR:
stoz02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
140399249 (srp54)
Eukaryotic Sec-SRP protein
140399249 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
ResIII
AAA_33
nSTAND3
AAA_17
DUF2209
SRPRB
AAA_22
NPHP3_N
nSTAND_NTPase5
MeaB
MobB
APS_kinase
AAA
AAA_19
Zeta_toxin
AAA_30
6PF2K
AAA_31
PduV-EutP
Thymidylate_kin
ATP_bind_1
nSTAND_NTPase7
AAA_16
KTI12
Torsin
ArsA_ATPase
AAA_18
Motif
Other DBs
NCBI-GeneID:
140399249
NCBI-ProteinID:
XP_072344787
LinkDB
All DBs
Position
2:296821210..296844925
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AA seq
504 aa
AA seq
DB search
MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADVNIKLVKQLRENVKAAI
DLEEMASGLNKRRMIQHAVFKELVKLVDPGVKAWTPTKGKQNVIMFVGLQGSGKTTTCTK
LAYYFQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVIIAAEGVEKFK
KENFEIIIVDTSGRHKQEDSLFEEMLQVSNAIQPDNIVYVMDASIGQACEAQAKAFKDKV
DVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTGEHIDDFEPFKTQPFISKLLGMGDI
EGLIDKVNELKLDDNEELIDKLKHGQFTLRDMYEQFQNIMKMGPFSQIMGMIPGFGTDFM
SKGNEQESMARLKKLMTIMDSMNDQELDNKDGAKLFSKQPGRIQRVARGAGVTTRDVQEL
LTQYTKFAQMVKKMGGIKGLFKGGDMSKNVNPSQMAKLNQQMAKMMDPRVLHHMGGMAGL
QTMMRQFQQGATGNMKGMMGFNNL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagcggatttggggaggaaaattacctccgcgctgcgatccctgagcaacgcc
accatcatcaatgaggaggttttgaatgctatgctaaaggaagtatgtacagctttactt
gaagcagatgttaatataaaactggtgaaacagcttcgagaaaatgtcaaagcagctata
gacttggaagagatggcctctggcctcaacaaaagacgaatgatccaacatgctgtattt
aaagaacttgtcaagcttgtagatccaggagttaaagcatggacccccacaaaaggaaaa
caaaatgtcatcatgtttgttggtcttcaaggtagtggtaaaactacaacatgtacaaag
ctagcgtactacttccaaaggaaaggctggaagacttgtttaatatgcgcagacacattt
agagcaggtgcatttgaccaactgaagcagaatgcaaccaaagcaagaattccattctat
ggaagctatacagaaatggatccagtgatcatagctgcagaaggtgtggagaagtttaaa
aaagaaaactttgagataataattgttgataccagtggtcgacacaaacaagaagattct
ttatttgaagaaatgttgcaagtttcaaatgccatacaaccagacaacattgtttacgtt
atggatgcatcaatcggtcaagcttgtgaagcacaagcaaaagctttcaaagataaagtg
gatgttgcatcagtaattgtaactaagctcgacggtcatgcgaaaggaggaggtgctctc
agtgctgtggctgccaccaaaagtccaatcatttttatcggtactggagaacacatagat
gattttgaaccattcaaaacacagcccttcattagcaaacttcttggtatgggtgatatt
gaaggtttaattgacaaggtaaatgagctgaaattggatgacaatgaagagttaatagac
aagcttaaacatggccagtttacactccgagatatgtatgaacagtttcaaaacattatg
aagatgggacctttcagtcagataatgggtatgatccctggctttggaactgatttcatg
agcaaaggcaatgaacaagaatcaatggcgaggctaaagaaactgatgaccataatggac
agtatgaatgaccaagaactggacaataaagatggtgctaaactcttcagtaaacagcca
ggaaggatccaaagagtggctcgaggagctggtgttacaaccagagatgtccaggaactt
ctgacacaatatacaaagtttgctcaaatggtcaaaaaaatgggaggaatcaaaggtctt
ttcaaaggtggtgatatgtccaaaaatgtcaacccatctcagatggccaaactcaatcag
cagatggctaaaatgatggatccaagagttcttcatcatatgggtggtatggctggtcta
cagacaatgatgagacagtttcagcaaggtgctactggcaacatgaaaggcatgatgggg
tttaacaacctttga
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