Scyliorhinus torazame (cloudy catshark): 140402372
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Entry
140402372 CDS
T11303
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140402372 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stoz03041
]
140402372 (snrpd2)
03032 DNA replication proteins [BR:
stoz03032
]
140402372 (snrpd2)
Spliceosome [BR:
stoz03041
]
Complex A
U1 snRNP components
Sm proteins
140402372 (snrpd2)
U2 snRNP components
140402372 (snrpd2)
Complex B
U1 snRNP components
140402372 (snrpd2)
U4/U6.U5 tri-snRNP components
140402372 (snrpd2)
Complex C
U2 snRNP components
140402372 (snrpd2)
DNA replication proteins [BR:
stoz03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
140402372 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
140402372
NCBI-ProteinID:
XP_072346209
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All DBs
Position
25:17218358..17230676
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AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgctaaacaagcccaagagtgagatgactcccgaggagcttcagaagcgagag
gaggaagagtttaacacagggcctctctccgttctgacgcagtccgtcaaaaacaacaca
caggtcctcatcaactgtcgcaacaacaagaagctgctcggccgagtcaaggccttcgac
agacattgcaacatggtgttagaaaacgtcaaagagatgtggaccgaagtgcccaagagt
gggaaaggcaagaagaagtcaaaaccggtcaacaaggaccgatacatctcgaagatgttc
ctcagaggggactctgtgattgttgtacttagaaacccattaattactggcaaatga
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