Scyliorhinus torazame (cloudy catshark): 140402435
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Entry
140402435 CDS
T11303
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140402435 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stoz03041
]
140402435 (snrpa)
Spliceosome [BR:
stoz03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
140402435 (snrpa)
Complex B
140402435 (snrpa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Motif
Other DBs
NCBI-GeneID:
140402435
NCBI-ProteinID:
XP_072346313
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All DBs
Position
25:complement(25303035..25313750)
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AA seq
278 aa
AA seq
DB search
MSIQESRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSRNLKMRGQAFVIFK
EVSSATNALRSMQGFPFYDKPMRIQYAKTDSDIIAKMKGTFVERDRKKEKRKVKAPEPSG
NKKASAPPTANAVPLPVSGMPMMNQAPRMMQMPGQPHYMPPPGMMPPPGMAPGQMPPGSI
PPGQMMAGQMPPPAQAVPENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRH
DIAFVEFDNEVQAGAARDALQGFKITQSNAMKISFAKK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtctattcaagaatcccgcccaaatcacaccatctacatcaacaacctgaatgaaaag
atcaagaaagatgagttgaagaaatcgctctacgctatcttttcccagtttggccagatt
ctcgacatccttgtctcccggaacctaaagatgcgaggacaagcctttgtgatattcaaa
gaagtcagcagtgccactaatgccctaagatcgatgcagggtttccccttctatgacaag
ccaatgcgaattcagtacgctaagactgattccgatattatcgctaagatgaagggcacc
ttcgtggagcgtgaccgcaagaaggaaaagaggaaggtgaaagctcctgagccttctggc
aacaagaaggcttcagcacccccaacagccaatgctgtgccccttcctgtctcgggtatg
cccatgatgaaccaagccccgcggatgatgcaaatgccaggacagcctcactacatgccc
ccgcctggtatgatgcccccgcctgggatggcacctggccagatgccaccaggttccatt
cctcctggtcagatgatggctggccagatgccgccccctgcccaggcggtgcctgagaat
ccacccaatcacatcctgttcttaaccaacctgcccgaggagaccaatgagctgatgctg
tccatgcttttcaatcagttccctggatttaaggaagtccgtctggtacctggtcgccac
gacatcgcctttgtggaatttgacaatgaggtccaagccggagcagcacgcgacgcgctc
caagggtttaagatcactcagtcgaacgcaatgaaaatctcctttgcaaagaaatga
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