Scyliorhinus torazame (cloudy catshark): 140403159
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Entry
140403159 CDS
T11303
Symbol
khsrp
Name
(RefSeq) far upstream element-binding protein 2 isoform X1
KO
K13210
far upstream element-binding protein
Organism
stoz
Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stoz03019
]
140403159 (khsrp)
03041 Spliceosome [BR:
stoz03041
]
140403159 (khsrp)
Messenger RNA biogenesis [BR:
stoz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
140403159 (khsrp)
Spliceosome [BR:
stoz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140403159 (khsrp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_KhpA-B
KH_KHD4_2nd
KH_PNO1_2nd
KH_NusA_2nd
CG7065_mid
Motif
Other DBs
NCBI-GeneID:
140403159
NCBI-ProteinID:
XP_072346957
LinkDB
All DBs
Position
27:6362179..6430520
Genome browser
AA seq
711 aa
AA seq
DB search
MAEFATAAPPHAAGAGAAGPGAAGAAFKKPDAFADAVQRARQIAAKIGGDTATTVNHSTP
EFGFVGQKRQLEDGDQPDSKKIAAQSDPIGAQLAAIHQQRATLTEDYRVPDGMVGLVIGR
GGEQINRIQQESGCKVQIAPGPNSDESGGLPERCVTLTGNSESIQAAKMLLDEIVSRGRG
GPPGQTHDTTNGQNGSIQEIVIPAGKAGLIIGKGGETIKQLQERAGVKMILIQDGSQNAN
VDKPLRIIGDPFKVQQARDMVMEILHERDQGGFGDRNEFGSRGGGGGGGGGGGGGGGGGG
GGGGGVGGLDIPVPRHSVGIVIGRSGEMIKKIQNDAGVRIQFKPDDGSTPDKIAHVMGPP
ERCQHAAQIITDLLQNVRAGPTGPPGPGMPGPGRGRGRGQGSWGMGPPGGEMAFSVPSHK
CGLVIGRGGENVKAINQQTGAFVELQRQPPPNGDPNFKLFTIRGSPQQIDHAKQLIEEKI
EGPLCPVGPPMPAGPMGPFQPGPFTQGPPGAPPPHPAAAGPPPPHQYPPQGWGNTYQQWQ
PPGPHDPSKAPGDPNAAAWAAYYQQYYQQPAAPVPPQQPAAAPPGPDPSQQPPVQGPGGQ
PDYTKAWEEYYKKLGQQNQPSQQPGPQQDYTKAWEEYYKKQAQNAQGAAAAAAAAPPQPG
AQPDYSAAWAEYYRQQAAYYGQPGAPQPAPQQPPAQQGQPVRPHPPPSYRF
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcggaattcgcgacggcggcgcccccgcacgcagcgggtgccggcgcggccgggccc
ggggcggccggagccgccttcaagaagccggacgctttcgcggacgcggtgcagcgcgct
cggcagatagctgctaaaattggaggtgacactgctacaacagtaaaccacagcacacca
gaattcggattcgttggtcaaaagcggcaactagaagatggagatcagcctgacagtaaa
aaaatagcagcacaaagcgatccgatcggagctcagcttgcagcaatacatcagcaaagg
gcaacccttacagaagattacagagtgccagatgggatggttggtctcgttataggcaga
ggtggggaacagataaaccgaatacaacaggagtctggttgcaaagtacagattgctcca
gggccaaatagtgatgaaagcggaggtttgccagaacgatgcgtcacgctgaccgggaac
tcagagtcaattcaggccgcgaagatgctactcgacgagatcgtgtcgcggggtcgaggc
gggcctccaggtcagacccacgatactactaatggccaaaatggatccattcaggagatt
gtgatcccagcaggaaaggctggactaattattggcaaagggggcgagaccatcaaacaa
cttcaggaacgtgctggagtgaagatgattttaatccaagatggttcacaaaatgctaat
gtagataaaccgctccgaattatcggtgacccttttaaagtgcagcaagcacgagacatg
gtgatggagattctgcatgaacgtgaccagggaggatttggggaccggaatgagtttggc
agccgaggaggtggtggtggtggtggtggaggaggaggaggaggaggaggaggaggtgga
ggaggaggaggaggagttggtggtttagacataccagtgccacggcattcggtaggaatt
gtaattgggcgaagtggagaaatgattaagaaaatacaaaatgatgccggagtccgaata
cagttcaaaccagatgatgggtctacgccagataagatagcgcatgtaatggggcctcca
gagagatgccagcatgctgcacaaataattactgaccttctgcagaacgtgcgggctggt
ccgaccggtcccccagggcctggaatgcccggccctggccgaggaaggggaagggggcaa
ggctcgtggggtatgggacctccaggaggagagatggccttctcagtccccagccacaag
tgtggtttagttatcggcagaggtggggagaatgtgaaggcgataaaccagcagactggt
gccttcgtggagctgcagagacagccgcctccgaacggcgatccaaacttcaaacttttc
accatccggggttcaccccagcagattgaccatgccaaacagctcattgaggaaaagatc
gagggtcccttgtgtcctgtgggtcccccaatgcctgctggcccgatgggacctttccag
ccaggacccttcacccaagggcctccaggagctcctcctccccatcctgctgctgccggc
ccacctcccccacaccagtatcctcctcaaggctggggtaacacgtaccaacagtggcag
ccgcccggaccgcacgacccaagtaaagctcccggagatccaaatgcagctgcctgggcc
gcctattaccaacaatattaccagcagcctgccgcgcccgtgccaccccaacagcccgct
gctgctccaccagggccagatccatcccagcaacctccagttcaagggccaggtggacag
cctgattacactaaagcatgggaggaatactacaagaagctaggccagcagaaccagccc
agccagcagcccggtccccagcaggattatacaaaagcatgggaagagtactataagaaa
caagctcaaaacgcgcagggggcggcggcggcggcagcagcagcaccaccacagccagga
gcccagccagattacagtgcagcctgggctgagtactacagacagcaggcagcttactac
gggcagcctggggcacctcagcctgccccccagcagccacctgcacaacaagggcaaccg
gtacgtccgcacccccctccttcctacaggttttaa
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integrated database retrieval system
