Scyliorhinus torazame (cloudy catshark): 140404440
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Entry
140404440 CDS
T11303
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein-like
KO
K02977
ubiquitin-small subunit ribosomal protein S27Ae
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03010
Ribosome
stoz04120
Ubiquitin mediated proteolysis
stoz04137
Mitophagy - animal
stoz04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
140404440
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140404440
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
140404440
04137 Mitophagy - animal
140404440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
stoz03011
]
140404440
04121 Ubiquitin system [BR:
stoz04121
]
140404440
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stoz04147
]
140404440
Ribosome [BR:
stoz03011
]
Ribosomal proteins
Eukaryotes
Small subunit
140404440
Archaea
140404440
Ubiquitin system [BR:
stoz04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
140404440
Exosome [BR:
stoz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140404440
Exosomal proteins of colorectal cancer cells
140404440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_S27
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
IBR
DUF2604
Dsc3_N
Ubiquitin_5
TBK1_ULD
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
140404440
NCBI-ProteinID:
XP_072349081
LinkDB
All DBs
Position
30:23829133..23829709
Genome browser
AA seq
155 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGAKKRKKSYTTPKKNQHKRKVVKLAVLKYYKVDEYGKIYRLRREC
PSEECGAGVFMASHFNRQYCGKCCLTYCFNKAEDA
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaaccctcacggggaaaacgataaccctcgaggttgagccctca
gatactattgaaaatgtaaaggctaagattcaggacaaagaaggtattccccctgatcag
cagcgactgatctttgctggaaaacagttggaggatggccgtacactctctgattacaac
atccaaaaggagtcaactttgcaccttgtattgagactccgtggtggtgccaagaagagg
aagaagtcttacaccacaccaaagaaaaaccagcataagaggaaggtggtcaagcttgct
gtccttaaatattacaaggtcgatgaatatggaaaaatctatcgtctgcggcgtgaatgt
ccttctgaagagtgtggtgctggtgtgttcatggccagtcacttcaacaggcaatactgt
gggaagtgttgtctgacatactgcttcaacaaggctgaagatgcataa
DBGET
integrated database retrieval system
