Scyliorhinus torazame (cloudy catshark): 140408755
Help
Entry
140408755 CDS
T11303
Symbol
lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5 isoform X1
KO
K18493
LIM homeobox protein 5
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stoz03000
]
140408755 (lhx5)
Transcription factors [BR:
stoz03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
140408755 (lhx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Auxin_canalis
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
140408755
NCBI-ProteinID:
XP_072352497
LinkDB
All DBs
Position
1:complement(68177738..68191137)
Genome browser
AA seq
407 aa
AA seq
DB search
MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFG
TKCAGCCQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEELYIIDENKFVCKEDYLN
TNSLKDTNLNSVSSCTDRSLSPDIQDQNLDDTKETDNSTSSDKETQNNENEEQSMGTKRR
GPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQL
SALGARRHAFFRSPRRMRPLGGRLDESEMMGSAPYNYYGDYQGDYYGPAANYDFFPHGPP
SSQAHSPADSGYMQSSGPGVTSLGVLEPPLPGHHPPTIGGSENQRYTDMISHPDTPSPEP
GMTGPLHPIPGEVFSGGPSPPFSMSSNSGYSGPLSHPSQELNETAVW
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggtacactgtgctggttgtgagagacctattttagatagattcctcctcaacgtgctg
gacagagcctggcacatcaagtgcgtccaatgttgtgaatgcaagtgcaacttgactgaa
aaatgcttttcgagagaagggaagctttactgtaaaaacgatttcttcaggcggttcggt
acgaaatgtgcgggatgttgtcaaggtatctctcccagtgacctcgtaagaaaagcaaga
aataaagtctttcacctcaattgctttacttgtatggtttgcaataagcaactgtcgact
ggagaggaactgtatattatcgacgaaaacaaatttgtgtgcaaagaagactatttgaac
accaacagtttaaaagataccaacttaaattcagtatcttcgtgtacagatcggagttta
tcgcccgatatccaagatcagaatctggatgacacaaaggaaacggacaattccacctcg
tcagacaaagagacgcagaataacgagaacgaggagcagagtatgggtaccaagcggaga
ggaccccgaaccaccatcaaagcaaagcagttagaaacattaaaagccgctttcgccgcc
acgccgaagcctacccggcacataagggagcaacttgctcaggaaacaggcctcaacatg
cgggttatccaggtctggtttcagaaccgaagatctaaggagaggcggatgaaacagttg
agtgctctgggtgcaaggcgacacgctttcttccgaagtcccaggcgcatgcgtcctttg
ggagggcgcctggacgaatcggaaatgatgggctctgctccctacaattactacggagat
tatcagggagactattacgggccggctgcaaattatgactttttcccgcacggcccgccg
tcctcgcaagcacattcgccggcggattccggctacatgcagtcctcaggacctggggta
acctcactcggagtacttgaacctcccttacccggtcaccaccctcccactatcggtggc
agcgaaaaccaaaggtatacggacatgatttcccaccctgacaccccgagccctgaacca
ggtatgaccggcccgctgcacccgatcccgggcgaagtgttcagcggaggacccagtccg
cccttctccatgtccagcaacagcggctacagcgggccgctctcgcatccgagccaggag
ctgaatgagactgcggtctggtga
DBGET
integrated database retrieval system
