KEGG   Scyliorhinus torazame (cloudy catshark): 140408916
Entry
140408916         CDS       T11303                                 
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
stoz  Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03030  DNA replication
stoz03410  Base excision repair
stoz03420  Nucleotide excision repair
stoz03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:stoz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    140408916 (rfc5)
   03410 Base excision repair
    140408916 (rfc5)
   03420 Nucleotide excision repair
    140408916 (rfc5)
   03430 Mismatch repair
    140408916 (rfc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stoz03032]
    140408916 (rfc5)
   03036 Chromosome and associated proteins [BR:stoz03036]
    140408916 (rfc5)
   03400 DNA repair and recombination proteins [BR:stoz03400]
    140408916 (rfc5)
DNA replication proteins [BR:stoz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    140408916 (rfc5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    140408916 (rfc5)
Chromosome and associated proteins [BR:stoz03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    140408916 (rfc5)
DNA repair and recombination proteins [BR:stoz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     140408916 (rfc5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    140408916 (rfc5)
SSDB
Other DBs
NCBI-GeneID: 140408916
NCBI-ProteinID: XP_072352910
LinkDB
Position
1:complement(76404479..76470698)
AA seq 332 aa
MATVKEPRSRNLPWVEKYRPQTLDDLISHQDILNTIQRFISEDRFPHLLFYGPPGTGKTS
TILASAKCLYKDKELNSMVLELNASDDRGIDIVRGPILNFASTRTIFKKGFKLVILDEAD
AMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPEQMIPRLEF
VIKEENVNITTDGLKAIVTLSNGDMRRSLNILQSTNMAYDKVSEDTVYTCTGHPLKSDIA
NILDWMLNKDFTTAYRNIMELKTLKGLALHDILTEIHTFVHRVDLPPSVRIHLLIKMADI
EYRLASGTSEKIQLSSLIAAFQVARDMVVAEA
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcgacggtgaaagagcctcggagcaggaaccttccatgggtggaaaagtatcgtccc
cagactctggatgatcttatttcccatcaggacatcctcaatacaattcagcggtttatc
agtgaagaccggttccctcaccttctgttctatggaccgccaggaactgggaaaacatca
actattttggccagtgccaaatgtctgtataaggacaaagagctaaactcgatggtttta
gagctgaatgcctcagatgatcgaggtattgacatagtacgtggacctatactgaatttt
gccagtaccagaaccattttcaaaaaaggtttcaagcttgttatcctagatgaggcagat
gccatgactcaagatgctcagaatgctctcagacgggttattgaaaaatttacagaaaac
accagattttgcctgatctgcaactacctgtcaaagatcatccctgctttacagtctcga
tgtaccaggttccgctttggtccgctgtcaccggagcagatgattccaagattggaattt
gtcatcaaggaagaaaatgtcaacataactacagatggactgaaggccattgtgacactt
tccaatggtgacatgcgtcgatctttgaatattttgcagagcacaaatatggcatatgat
aaagtgagcgaggatacggtgtacacttgtacaggtcatccactaaaatcagacatcgca
aacatccttgactggatgttaaacaaagacttcaccactgcatacagaaatatcatggaa
ttaaagaccttaaaaggtttagccctgcatgacattttgactgaaattcatacttttgtg
cacagagttgatttgccaccttcggttcgtattcatttattgatcaagatggctgatata
gagtacaggctggcttcaggaacgagtgagaaaattcaattgagctcacttattgctgca
tttcaagttgcccgtgatatggttgttgctgaagcctag

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