Scyliorhinus torazame (cloudy catshark): 140410583
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Entry
140410583 CDS
T11303
Symbol
atad2b
Name
(RefSeq) ATPase family AAA domain-containing protein 2B isoform X1
Organism
stoz Scyliorhinus torazame (cloudy catshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Bromodomain
AAA_lid_3
AAA_16
AAA_2
AAA_22
IstB_IS21
AAA_5
AAA_7
NPHP3_N
RNA_helicase
nSTAND3
Mg_chelatase
AAA_28
RuvB_N
AAA_18
TIP49
DUF2737
Parvo_NS1
DUF2935
Motif
Other DBs
NCBI-GeneID:
140410583
NCBI-ProteinID:
XP_072354961
LinkDB
All DBs
Position
4:166486284..166705592
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AA seq
1460 aa
AA seq
DB search
MVRTRRNSALESELISGRISSRTRSSRSSAKHDDSKRQNAGNDEASLSDSQAEPPAKLRR
RNADPVSSDLSTERGPHNSGPAEEWCGSTRQSRLTTHAGASMQNGHSSLVLRNPGSRRES
QEDGNHSHMNGDSEVRRSGRARRNKFETLNQSLLFDQLVNSTAEAVLQEMDHITSNIRQN
RRPGEVERLRMWTDTEFENMDMYSRVKRKRKPLRRNMYGMPIHVEEASEGEEEEEEEGSE
ESQEEEEDGDEVEEAEENDRPYNLRQRKAVQRYQAPPIEPVHRRQRQSTLFDTLRSPARR
THIRRKKHAIHSSDTTSSSDEERFERRKSKSMARARNRCLPMNIRTEDLTSEILRERVKV
GASLADVDPMHLDASVRFDSVGGLSQHIQALKEMVVFPLLYPEVFERFKIQPPRGCLFYG
PPGTGKTLVARALANECSLGDKKVSFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSI
IFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEVVIIGATNRLDSIDPALRRP
GRFDREFLFSLPDKKARKHIFQIHTRDWNPKLLQGFLDELAEKCVGYCGADIKALCTEAA
LFALRRRYPQIYATSQKLQLDVSSIVLSAQDFYLAMQNIVPASQRAVTSSGEALSHIIRP
LLKNVFTRILIALYKVFPHAEQTPNDNKDDGVNHILGDYIPSDDEVEPAIFDSNSSLGSP
KKQPPATKHKPFMHFSMSAHHQPTSHRPRFLLCGSKGSGQSSHLAPAVLHSLEKFSVHRL
DLPAVYSVSAKTPEESCAQVFREARRTVPSIIYVPHIKEWWDAVSDTVRATFLTLLQDVP
PFSPILILATSETEYIELPDEVKCIFEIHYGEVIDLQTPNEDERTSFFEDLILNQAAKPP
PRKKKAALLALEVLPPALPPTPRQLSEEEIKRIEEQEENTFRELRLFLRDITKRLATDKR
FSIFSKPVDIEEVSDYLEVIIQPMDLSTMMMKIDNHKYETVKDFLIDINLICSNALEYNP
DTVPGDRIIRHRACTLKDTAHAIVAAELDPEFNKLCEDIKESRRKRNLQSVAEQTSRSIE
TKRDLAQDSSRNLEASTTNGECKHTIHIKRKPRRRSKWGRGIIKKPRKVIHLKKEDDYIK
NNEHDGDQGEESELAENGELEVSTDYHENGDLSLTNDESSCDIMDVAQVGNKLENGTMEK
GSGDLKSTGKKDCAGYQLDGNNEFSKRKTNAAPGEQCVPNDACTPGKGLVPNECTWSDES
MASAESESVQECLAGRTCTSGNPAPGNDLSDAKHEPGREREPIKESMTQLVPNSKLLVME
KGKKQLVEDSSHTVTGAAQAAIATKCSQNEDVDLKSLGSEKDVLGRMKPDRSVHGEQKTV
HMEQVLEDSSEPTPPIILDHVRLKHVLQLAIKKSNNFTVDQLEKLYSLFSQCIYRHRKEY
DKSHLLEEMENLLKTFQTFL
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atggtgcggactcggcggaactcggcgctggagtcggagctgatcagcggccgcatctcg
tccaggacccgctcgtctcgctcctccgccaaacacgacgacagcaagcggcagaatgct
ggtaacgatgaagcaagtttgagtgatagtcaggcggaaccacctgcaaaactgaggcga
agaaatgctgatccagtttctagtgatctttcaactgagcgtggtccacataacagtggt
ccagcagaagaatggtgtggctcaacaaggcaatccaggttaactactcatgcaggtgct
tcaatgcaaaatggtcacagtagtttggttctcagaaatcctggaagtcgacgtgaaagt
caagaggatgggaaccattctcacatgaatggagattcagaagttagaagaagtggtcga
gcacgaagaaacaaatttgaaaccctcaaccaaagcctcctattcgatcagctggtaaac
agtactgcagaagctgttctgcaagaaatggatcacattacaagtaacattagacaaaac
agaagaccaggagaggtggaacgtctcagaatgtggacagatacagagtttgaaaatatg
gatatgtattcccgtgtgaagaggaaaaggaaacctttaagaagaaacatgtatggaatg
ccgatccatgttgaagaagctagtgaaggagaggaagaggaggaagaagaaggaagtgaa
gaatctcaggaagaggaggaggatggagatgaagttgaagaggctgaagaaaatgacaga
ccatacaacctgaggcaacggaaggctgtacaaagataccaagcccctccaatagagcct
gttcatcggagacaaagacaaagcacactatttgatacactccgatctcctgcgaggagg
actcacatcaggagaaagaagcatgcaatccacagcagtgacaccacatcatcatctgat
gaagaacgttttgaaagaagaaaatctaaaagcatggcacgagccagaaacagatgcctt
ccgatgaacattagaacagaagatttaacaagtgaaatccttagggaacgagtcaaagtt
ggtgccagtttggctgatgtagatccaatgcacttggatgcgtcagtgcggtttgatagt
gtgggagggcttagccagcatattcaagctctcaaagaaatggtcgtttttcctcttctg
tatcctgaagtatttgaacgattcaagattcagccaccaaggggttgtttattctacgga
ccacctggaactggcaaaaccttggtagctagagccctggctaatgaatgcagtctagga
gataagaaagtttcattcttcatgcgaaaaggtgcagattgtctaagcaaatgggtaggg
gagtctgagcgacaacttaggctcctgtttgatcaggcttacttaatgcgtccctccatt
attttttttgatgagattgatggtctagcgccagtgcgttcaagtagacaagatcaaatt
catagctcgatagtctctacgttgctggcactgatggatggactggacaatagaggggaa
gtggttataattggtgctacaaatagacttgattccattgaccctgcgctcaggagacct
ggtcgttttgacagggaattcctttttagcctgcctgataaaaaggcacgaaagcacata
tttcagatccataccagagactggaatccaaaactgttgcagggtttccttgacgaatta
gctgaaaaatgtgtaggctactgtggggctgatattaaagcactttgcactgaggcagcc
ttgtttgcccttcgccgacgctatcctcagatttatgcaactagtcagaagctgcagctg
gatgtctcctccattgttttaagtgcacaggacttctaccttgccatgcagaacattgtg
cctgcttcacaacgagctgtgacctcatcaggagaagcactatcgcacatcattaggcct
ctgttgaaaaatgtctttacaagaattctaattgctttgtacaaggtttttcctcatgcg
gaacagacaccgaatgacaacaaagatgatggtgtgaaccacattctgggagattacatc
cccagtgatgatgaggttgaaccagcaatttttgacagtaattcttcattgggatcacca
aagaaacaaccaccagctactaaacataagccctttatgcacttctccatgtcagcccat
caccagccaacatcccatcgcccacggttccttctttgtggaagcaaagggtctggtcag
agttcacatcttgctcctgcagtgcttcattcacttgagaagttctccgtacataggtta
gatctgccagcagtgtactcagttagtgccaaaacaccagaggagtcatgtgcacaggtt
ttccgtgaagcacgtcggacagtaccaagtataatttatgtgcctcacattaaagaatgg
tgggatgcagttagtgatacagtgagagctactttcttgactctgcttcaggacgtacca
cccttttcccctattttaatattggctacctctgaaacagaatatattgagctgccagat
gaggttaaatgcatttttgaaatccattatggggaagttatagatttacagacacctaat
gaagatgaaagaacaagtttctttgaagatttgatattaaaccaagcagcaaagcctcca
ccaaggaagaagaaagctgctttacttgccttggaagtccttccaccagcactgcctcct
acaccacggcaactatcagaggaagaaataaaaaggatagaagaacaggaggaaaatacc
tttcgggaacttcgactatttctcagggatattaccaaaagacttgccactgacaaacgt
tttagtatctttagtaagcctgtggatattgaagaggtttctgactatttggaagtaatc
atacaaccaatggatttatcaacaatgatgatgaaaattgacaaccacaaatatgaaacc
gtgaaagacttcctgatagatattaacctcatctgtagcaatgctcttgagtataatcct
gatacagttcctggagatcgcataattcgtcacagagcctgtacacttaaggatactgca
catgcaatagtcgccgctgaactagatcctgagtttaacaaactctgtgaagatatcaaa
gaatccaggaggaaacgaaacttgcaatcagtagcagagcaaacaagtcgcagtatagaa
acaaaaagagacctggctcaagactcatctcggaatttggaagcaagtaccacaaatggg
gaatgtaaacatacaattcacattaaaaggaaaccacgtcggcgttccaaatggggccga
ggtattattaagaaaccaaggaaggttatacaccttaagaaagaagacgattatattaaa
aataatgaacatgatggtgaccaaggtgaagaaagtgaactagcagagaatggagaactg
gaagtgagtacagattatcacgaaaatggtgatctctccctgacgaatgatgaatcatcg
tgtgatatcatggatgttgcccaggtgggaaataaacttgaaaatggtacaatggaaaaa
gggagtggtgatctcaaatccacaggaaaaaaggactgtgcaggctatcaattagatggg
aataatgagttttccaaaagaaaaacaaacgctgccccaggagaacagtgtgtacctaat
gatgcatgcactcctggcaaggggttggtacctaatgagtgtacgtggagtgatgaatct
atggcaagtgctgaaagtgaatctgttcaagaatgtttggctggcaggacgtgcacatct
ggtaatcctgcacctggtaatgatttgtctgatgcaaaacatgaacctggaagggaacgt
gaacctatcaaggagtccatgactcagcttgtgccaaactcaaagttacttgtaatggaa
aaaggcaaaaaacagctggttgaagatagttctcacactgtcactggtgcagcacaggca
gccattgcaacaaagtgttcacaaaatgaagatgttgatctaaaatcactaggatctgaa
aaagatgttttgggcaggatgaaaccagatcgttcagtacatggagaacagaagacagtg
cacatggaacaggtgttggaagactcttcagaacctacacccccgatcattttggaccat
gtgcgactaaagcacgttctccagttggccattaagaagagcaataattttacggttgat
caactcgaaaagctttattctttgtttagtcaatgtatctatcgtcatcgcaaagaatat
gacaaatcccatttgcttgaggaaatggagaatctattaaagacctttcagacattcctg
tga
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