Scyliorhinus torazame (cloudy catshark): 140410913
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Entry
140410913 CDS
T11303
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140410913 (tbpl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stoz03000
]
140410913 (tbpl1)
03021 Transcription machinery [BR:
stoz03021
]
140410913 (tbpl1)
Transcription factors [BR:
stoz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
140410913 (tbpl1)
Transcription machinery [BR:
stoz03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140410913 (tbpl1)
RNA polymerase III system
TFIIIB
140410913 (tbpl1)
RNA polymerase I system
SL1/TIF-1B
140410913 (tbpl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
140410913
NCBI-ProteinID:
XP_072355827
LinkDB
All DBs
Position
4:complement(263788228..263888434)
Genome browser
AA seq
186 aa
AA seq
DB search
MEPDNDIALDILITNVVCVFKTRCHLNLRKIALEGTNVIYKRDVGKVLMKLRKPRITATI
WSSGKIICTGATSEEDAKTGARRLARLLQKLGFQVKFAGYKVVNVLAVCTMPFEIRLPEF
TKRNRPIASYEPELHPAASYRVKALKATLQIFSTGSITITAPSIQCVATAVEQTYPLIFE
SRKMIK
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggaaccggacaatgatattgcactggatattttgataacaaatgtagtctgtgtcttt
aaaacaagatgccatttaaatcttcggaagattgcactggaaggaacaaatgtgatctac
aaaagagacgttggaaaggtgttaatgaaactgaggaaacccaggataacagccacaatc
tggtcctcggggaaaatcatatgcactggagctacaagtgaagaagatgcaaaaactggt
gctcgaagattagcccgccttctgcagaaactgggttttcaggtaaaatttgctggctat
aaagttgtcaatgttctggctgtgtgcactatgccatttgaaattaggctaccagaattc
accaaaagaaatcggccaattgcaagctatgaaccagaactccatcctgcagcgtcttat
agagttaaagcattgaaggctacacttcaaattttttccacaggaagtataacaataaca
gcacccagtatacagtgtgttgccactgcagtggagcaaacttatccattaatctttgag
tctcgaaagatgatcaaataa
DBGET
integrated database retrieval system
