Scyliorhinus torazame (cloudy catshark): 140410973
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Entry
140410973 CDS
T11303
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
Organism
stoz Scyliorhinus torazame (cloudy catshark)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
ASCC3_N
ResIII
Helicase_C
Helicase_PWI
T2SSE
AAA_19
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
140410973
NCBI-ProteinID:
XP_072355941
LinkDB
All DBs
Position
4:complement(280861908..281675766)
Genome browser
AA seq
2209 aa
AA seq
DB search
MELPRLTGALRSFSNVTRQDEYIADSSEMMAKRSKRKEHSCKTRLTWKNITHLVEKVAQN
EHQNVGENVKNLLKAARQLVGIEQEQETVESAAVFLFKIFHDKDHVGHEETKAVKQMFGP
FPPSAATAACNAVYRIASTFSDEELQKLVCADESASQISRVHFGKNINFSFDSFALEPSG
ELPLNWESYNQKDFSLDYDKYFNNHQGDFKNGSIDNPDLKCSNKVDGSFLRQEVDRYIIG
ILQESSDRPTTDDLCGTLLEMLASNKSDDELQNELFELLGAEGLELIEKLLQQRRTIVEK
TLTHTTDLKLSYLQEASKKGIGGNAQPIYGCQVTVQSEQEKQLLKQYRREEKRLAKREKK
DEGEFSEGLQYFDPKELRSHREHALQNARIAPILTRQHDYERIHYPNVYDSKGEAMQSPA
FIAGAKMFLPEDVERENNKVYEQVVIPATQPMPTGIQEKPIDIKNLDEIGQLVFKGMKRL
NRIQSIVFEIAHNTNENMLICAPTGAGKTNIAMLTVLHEIRQHIQQGVIRKDEFKIIYVA
PMKALAAEMTNYFSKRLEPLGILVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTRKSVG
DVALSQIVRLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPNFLDV
ATFLHVNPYIGLFFFDGRFRPVPLKQTFIGVKASNKMQQLRDMEEVCYEKVLIQLKEGHQ
VMVFVHARNSTVRTAMALQEMAKNQGDIMYFAPNQSADYGSAEKQIQKSRNKQLRELFPD
GFGIHHAGMLRQDRNLVESCFSRGHMKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRGS
FVDLGILDVMQIFGRAGRPQFDKFGEGTIITAHDKLSHYLTLLTQQNPIESQFLDRLADN
LNAEIALGTVTNVEEAVKWLSYTYLYVRTRANPLAYGINYKAYQMDPGLERYRQELVIEA
GQKLDKARMVRFEARTGYFSITDLGRTASHYYIQYNTIETFNELFSTHNTEADIFALVSK
AEEFEQIKIREEEMEELDQLLCNYCELPVAGGVENTYGKVNILLQTYIGHGELDSFSLIS
DTAYVAQNAARIVRALFEVALRRRWPAMTYRLLNLCKIIDKRLWGWCNPLRQFSVLPGHV
LAKLEEKKLTIDKMKDMRKDEIGHMLHHVNIGLKVKQCVHEIPSIALEASIQPITRTVLR
VRLTITPDFKWHDQTHGSVGEPWWIWVEDPVNDHIYHSEYFLLQKKQVLSKEQQLLVFTI
PIFEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPINALGNRE
YEALYKFTHFNPIQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVY
IAPLKALVRERIEDWKIRITEKLGKNVVELTGDVTPDMKAIAQADLIVTTPEKWDGISRS
WQNRGYVKKVSIIIIDEIHLLGDERGPVLEVIVSRTSFISSHTNSPVRIVGLSTALANAK
DLADWLGIRQNGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMASMNKPTFQAIRSHSPSKP
VLIFVSSRRQTRLTALDLIAFLAAEDDPKQWLHMDEREMSDIIEMVRDSNLKLTLAFGIG
LHHAGLHEHDRKHVEELFVNCKIQILIATSTLAWGVNFPAHLVIVKGTEYYDGKTRRYVD
FAITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLEVLSDHMNA
EISAGTVSSKQDAMDYITWTYFFRRLIMNPSYYNLDDINHDTMNKYLSNLVEKSLADLEC
SYCISVGEDSRSLQSLDLGRIASYYYLKHQTMKMFRSKMKADCCLEDLLSVLTDATEYAD
LPVRHNEDQLNSDLAKHLPIEVNPHSFDSAHTKAHLLLQAYFCRAALPCPDYATDTKSVL
DQAIRICQAMLDVAANNGWLVTALNIINLIQMVIQGRWVHDSSLLTLPNIEQQQLYLFRR
CNAGKRKSSSKGYKGPIECLPELIAACEWREDIFHSIVADELQPTQISQTWKFLSHLPII
EVNLNIKGWWEKAPKGKSEKPLPNVGTGFRDEKNWTQLHADQEYVLQINLCRIGLVRNKG
KYDSKASTPRFPKAKDEGWFIILGEVDKKELVALKRVGYIRNRSTVCLAFYTPEATGRYI
YTLYLMNDSYLGMDQQYDIYLDVIPASIVAQVNTEVSDARSDLTVARHD
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atggaactacctcgtctaacaggagctttgcgctccttctcaaatgtcaccaggcaagat
gaatatattgcagattcttcagagatgatggccaaaagatcaaagcggaaagagcattcc
tgcaagacacgattgacttggaaaaatataacccatttagttgagaaagtggcacagaat
gagcatcaaaatgttggtgaaaatgtgaaaaatctcttaaaggctgccagacagcttgtt
ggaattgaacaagaacaggagactgttgaaagtgctgctgtttttctcttcaaaattttt
cacgataaggaccacgttggacatgaagaaacaaaagccgttaaacaaatgtttggacca
ttccccccttcagctgctactgctgcctgtaatgcagtgtataggattgcctcgactttt
agtgacgaagaactacagaaactagtttgtgcagatgagtctgcaagccaaatttcccga
gtacactttggtaaaaacataaatttttcatttgattcatttgctttggaaccttcaggg
gaattgcccttgaattgggagtcatacaaccaaaaagatttcagtctagattatgataag
tatttcaataatcatcaaggagattttaaaaatggatcaattgacaatccagatctgaaa
tgttcaaacaaagtggatggttcatttttaaggcaagaagttgatcgctacattattgga
atcttacaagagtcatcagatagaccaacgacagatgacctgtgtggaacattgttggag
atgctggcatctaataaaagtgatgatgaacttcaaaatgagttgtttgagcttcttgga
gctgaaggattggagctaattgagaaacttctgcagcagaggcgtacgattgtagaaaaa
accctcacccacacaacagacctcaagctcagttatcttcaggaggcttcaaaaaaaggt
attgggggaaatgcacaacccatttatggctgtcaagtcactgttcagtccgaacaagaa
aagcagttattaaagcagtatcgtagagaagaaaaacgtttagccaagcgagagaaaaaa
gatgaaggggaattttcagaaggacttcaatactttgatccaaaagaattacgatcacat
agggagcatgcacttcagaatgcacgaatagcaccaattcttacgaggcagcatgattat
gaacgaatccattacccaaatgtttatgattcaaaaggtgaagcaatgcaatcgccagct
tttattgctggtgcaaagatgtttcttccagaagatgttgagcgagagaataacaaagtc
tatgaacaagtagtcatccctgcaacacagcctatgccaactggcattcaggagaaacct
attgatatcaaaaacttggatgagattggacagttggtttttaaagggatgaagcgactg
aaccgcatccagtcaatagtgtttgagatagctcacaacacaaatgagaatatgctgatc
tgtgcacctactggagctgggaaaactaacattgccatgcttactgttctgcatgaaatc
cgccagcatattcagcaaggagttatcagaaaggatgagttcaagattatctatgtagct
cctatgaaggctttagctgctgagatgacaaattactttagcaagcgtctggaaccattg
ggtattctggtgaaggagctcactggcgacatgcagttgaccaaaggagaaatattacgg
acacagatgcttgtgacaacacctgagaaatgggatgtggtaacacgtaaaagtgttggt
gatgttgccttgtctcagattgtcagactattaattttagatgaagttcacctattacat
gaagatagaggaccagttcttgaaagcttggtggcacgaacactacgacaggttgagtcc
acccaaagtatgatcagaattctcggtttatcagccaccctgccaaacttccttgatgta
gccacgttcctccatgtaaatccatatattggactgtttttctttgatggacgttttcga
cctgtgcctctgaaacagactttcataggtgttaaagcgtcaaacaagatgcagcaactg
cgtgatatggaggaagtatgttacgagaaggttctgattcaactgaaggaagggcaccag
gtgatggtgtttgtgcatgcaagaaattcaactgttcgaacagctatggctcttcaagag
atggcaaaaaaccagggtgatatcatgtactttgcgccaaaccaaagcgcggactacggc
tctgctgaaaaacagattcagaaatcccggaacaaacagctccgtgagttgttcccagat
ggatttggcattcaccatgctggaatgttacgtcaggaccggaatttggttgaaagctgc
ttttcgcgtggacacatgaaagtgttggtttgcacagctaccttggcctggggtgtcaat
cttcctgcgcatgctgtcatcatcaagggcactcaaatatatgatgcaaagaggggctcc
tttgttgaccttggaattttagatgtgatgcagatttttggcagagctggacgaccacag
tttgacaaatttggtgaaggcacaatcatcactgctcatgataaactgagtcattactta
actctactgactcagcagaacccaattgaaagccagtttctggatcgtttggcagacaat
ctaaatgcagagatagccttgggaacggtaactaatgtagaagaagcagtgaaatggctg
agctacacctacctttatgtgcggacgagagcaaacccattagcttatgggatcaattac
aaagcttaccagatggaccctggattggaaagatacaggcaagagctcgtcattgaggct
ggccaaaaactagacaaagccaggatggttcgttttgaagcaaggactggttatttttca
ataacagatcttgggagaactgccagccactactatattcaatacaatacgattgagact
ttcaacgagctgtttagcactcacaatactgaagcagacatttttgctcttgtatctaaa
gctgaagaatttgagcagatcaagataagagaggaagaaatggaggagcttgatcagctg
ctatgcaattactgtgagctgcctgtcgcaggtggagtagagaacacctatgggaaagtg
aacattcttcttcaaacctatattggtcatggagagttggatagcttctcgctcatttct
gacactgcatatgttgcacagaatgcagctcgtattgtacgtgcccttttcgaagttgcc
ctaagaaggcgatggcctgcaatgacgtaccgcctgttgaatttgtgcaagataattgac
aagagattatggggttggtgcaatccactacgccaattctccgtcttgccaggccatgtg
cttgcaaaactggaggaaaagaaactcaccatagacaagatgaaggacatgcgcaaggat
gaaataggtcacatgttacatcatgtgaacattgggttaaaggtgaagcaatgtgtccat
gaaattccttccatagctctggaagcgagcatacagcctatcacacgcactgtccttcgt
gtccgattgaccatcactccagacttcaaatggcatgatcagactcatggatctgtaggt
gaaccctggtggatttgggtggaagatcctgtgaatgaccacatatatcactcggaatat
ttcctcctccagaagaagcaggttttgtccaaagagcagcagcttctggtatttaccatt
cctatttttgagccattgccctctcaatactatatccgggctgtgtctgatcggtggctg
ggagctgaggctgtgtgcataataaactttcagcatctgattttgccagagagacatccc
cctcacactgaattgcttgacctgcagccattgcccatcaatgctctgggaaatagagag
tatgaagcactgtacaagttcacccacttcaacccaatccagactcagatatttcacacc
ctctatcacactgactgtaatgtactacttggagcgcccactgggtctggaaagacggtc
gcagctgaactggcaatatttcgcgttttcaacaaatacccaacatcaaaggctgtttac
attgctcctctcaaggcacttgttcgtgagcgaattgaggattggaaaatccggattact
gagaagctgggtaaaaatgtagtggaattaactggggatgtgactccagacatgaaagca
attgcacaggccgacctcattgtcacaacccctgagaaatgggatggtatcagcagaagt
tggcagaatagaggctacgtcaagaaggtgtcaatcatcattatagatgaaatccacttg
ctaggggatgaaagaggtcctgtgctggaggtaattgtgtccagaactagtttcatctca
tctcatacaaatagccctgtaaggatagtggggctgtctactgcactggcaaatgccaag
gacttggctgactggttaggtatccgacagaatggattgtttaactttagaccatctgta
cgtccagttcctcttgaagttcacattcatggctttccaggccagcattattgtcctcgc
atggccagtatgaacaagccaacattccaagctattcggagccattccccttccaagcct
gtgctgatctttgtgtcatccagacgtcagactcgcctcacagctttggatttgatagcc
tttctagcagcagaggatgaccctaagcagtggctgcacatggatgagcgagagatgagt
gatatcattgagatggtgagagattccaatctaaaacttaccttagcctttggcattggt
ttacatcatgctggactccacgaacatgaccggaagcatgtggaagaactctttgtgaac
tgcaaaatccagattcttattgcgacaagcactttagcttggggagtgaacttccctgct
catttagtcattgttaagggtactgagtactatgatggaaaaacaagacgttatgtggac
tttgcaattacggatgttctgcagatgatggggcgtgcaggcaggcctcagtttgatgac
cagggcaaagctgtgatattagtccatgatattaaaaaagacttctacaaaaagtttctg
tatgaacctttccctgttgaatcaagtttgttggaggtgctttctgatcacatgaatgct
gaaatttctgctggaactgtctcatccaagcaagatgccatggattacattacatggacc
tacttttttcgacgtcttatcatgaatcccagttattacaacctagacgatattaaccat
gacacgatgaacaaatatctttctaaccttgtggagaagtctcttgcagatctggaatgt
tcctattgtatttcagtaggggaggacagtcgcagcctccaatcactggatttaggccgt
atagcctcttattattacctgaaacaccaaacaatgaaaatgttcaggagcaaaatgaaa
gcagattgttgtttggaggacttgctttctgttctaacggatgctacagaatatgcagac
cttccagtgcgccacaatgaagaccagctgaatagtgacctggctaagcatcttcccata
gaagtgaacccacattcattcgacagtgcgcacactaaggcccacctgctgctccaagca
tatttttgccgagctgctttgccatgccccgattatgctacagatacaaaatctgtgctg
gaccaggccattcgaatctgtcaggctatgctggatgtggcagcgaacaatggctggctc
gttacagcactgaatataatcaacctaattcaaatggtgattcaaggcagatgggtacac
gactcctctctgcttaccctgccaaacattgagcagcaacaactctacctcttcaggaga
tgcaatgcaggcaaaaggaaaagcagctccaaaggttataagggtcccattgaatgtctt
cctgagttgatagctgcctgtgaatggagggaggacatatttcattccatcgtcgctgac
gaactgcagcctacacagatttcccagacttggaaattcttgtcccatctgccaatcatc
gaggttaatctgaatatcaagggctggtgggaaaaagctccaaaaggaaaaagtgaaaaa
ccgctgcctaatgtgggcactggcttccgagatgagaagaactggactcagctccatgcg
gatcaagaatacgttctccagatcaatctgtgcagaatcggcctggttcgcaacaaggga
aagtatgacagcaaagccagcacaccacgcttcccgaaggccaaggacgagggctggttt
atcatcctaggggaagtggacaagaaggaattagtggctttgaaacgagtgggatacatt
cgaaatcgaagcactgtctgtctagctttctacacccctgaggccactggaagatatatc
tacactctctatctgatgaatgatagctatctggggatggaccagcagtatgacatttat
ttggacgtgataccagcgagcattgttgctcaggtcaacaccgaggtctctgatgccagg
agtgacctgacagtggcacgacatgactga
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integrated database retrieval system
