Scyliorhinus torazame (cloudy catshark): 140411047
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Entry
140411047 CDS
T11303
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03082
ATP-dependent chromatin remodeling
stoz03083
Polycomb repressive complex
stoz04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140411047
03083 Polycomb repressive complex
140411047
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
140411047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stoz03036
]
140411047
Chromosome and associated proteins [BR:
stoz03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
140411047
Histone modification proteins
HAT complexes
HATB complex
140411047
HDAC complexes
Sin3A-HDAC complex
140411047
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
140411047
PRC2.2
140411047
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
140411047
Heterochromatin formation proteins
Other heterochromatin formation proteins
140411047
Chromatin remodeling factors
NuRD complex
140411047
NuRF complex
140411047
NuRF complex (fruit fly)
140411047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140411047
NCBI-ProteinID:
XP_072356138
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Position
1:112642582..112717444
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AA seq
472 aa
AA seq
DB search
MTDKEASDAHYDVTPVTSHTHCSSLLTAASPVQSTHLDTTPAICHEWKRGKKTAFDDAVE
ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTS
DEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM
PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL
LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM
IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF
ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH
TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAPDPEGQGS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacggacaaagaagcatcagatgcccattatgatgttacacctgtgacgtcacacacc
cactgttcttcattactgacggccgcctcacctgtgcagtccactcatctcgacacgacg
ccagccatttgtcatgaatggaaacgaggaaaaaaaacagcctttgatgatgctgtggaa
gaacgtgtcattaatgaagaatacaagatctggaagaaaaacactccctttttgtatgac
ctggttatgactcatgctctggaatggcccagtctgactgcccagtggttacctgatgtc
tctagacctgaggggaaggactacagtgttcacaggctggtgctgggaacccatacatct
gatgagcaaaaccatctggtcatagccagtgttcagctaccaaatgatgatgcacagttt
gatgcttcacactatgatagtgaaaagggagaatttggtggatttggttctgttagtgga
aaaatagagattgaaataaaaataaaccatgagggggaagtaaatcgtgcccgctacatg
cctcaaaatccttgtattattgctacgaaaactccctccagtgatgtgttggtctttgat
tataccaaacatccttccaaaccagatccctccggtgaatgcaatccagatcttcggttg
cgtgggcaccaaaaggaaggctatgggctctcgtggaatcccaacctcagtggccatcta
cttagtgcttcagatgatcataccatctgcttatgggatatcagtgctgtacctaaagaa
ggaaaagtagttgatgcaaaaactatctttactggtcacacagcagtagtggaagatgtg
tcatggcacttgctgcatgagtctctgtttggttccgtggcagatgatcagaaactaatg
atctgggataccagatctaacaacacatctaagccaagccattctgttgatgcacacaca
gcagaagtgaactgtctttccttcaatccttacagtgaatttatcttggcaactggttct
gctgacaagactgtggcattgtgggatttgagaaacctgaaactgaagttgcattccttt
gaatcacacaaggatgagatcttccaggttcaatggtctcctcataatgaaacaatcctg
gcatcaagtggaacagatcgcagattgaatgtgtgggatttgagtaaaattggagaggaa
cagtctcctgaagatgcagaagatggccctccagagctgttgtttatccatggtggtcac
actgctaagatttcagatttttcttggaacccaaatgagccatgggtaatttgctctgta
tctgaagacaatatcatgcaagtgtggcagatggctgaaaatatttacaacgatgaagat
cctgagggagctcctgatccggaaggtcaaggctcatag
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