Scyliorhinus torazame (cloudy catshark): 140414279
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Entry
140414279 CDS
T11303
Symbol
wdtc1
Name
(RefSeq) WD and tetratricopeptide repeats protein 1
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
stoz
Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stoz04121
]
140414279 (wdtc1)
Ubiquitin system [BR:
stoz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
140414279 (wdtc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_Gbeta
EIF3I
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
Beta-prop_WDR36-Utp21_1st
TPR_19
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
DSE1_N
TPR_2
Beta-prop_HPS5
PAC11
TPR_16
TPR_1
ANAPC3
TPR_17
Beta-prop_EIPR1
Beta-prop_Aladin
TPR_11
Beta-prop_SPT8
TPR_6
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_WDR41
TPR_BSK1_C
Beta-prop_WDR35_TULP_N
RMD1-3
CFAP70_TPR_C
TPR_9
Barstar
Motif
Other DBs
NCBI-GeneID:
140414279
NCBI-ProteinID:
XP_072357071
LinkDB
All DBs
Position
1:146798341..146923092
Genome browser
AA seq
672 aa
AA seq
DB search
MEPLNITRDIIQRQIKEKNTLQFERRYHVIDPFIKRLGLECELEGHSGCVNCLEWNEKGD
LLASGSDDQHAILWDPFSCKKLLTMHTGHTANIFTVKFLPHSNDRTLITGAADSKVHVHD
LTVKETVHMFGEHTNRVKRIAAAPMWPNTFWSAAEDGTVRQYDLRESSKRSQVLVDLTEY
CGQHVEAKCLAINPQNNNYLAVGASGPFVRVYDVRMIHNHRKTVKQSLTPGLHTFCDRYK
SVPDGAVQYYVAGHLPVKQPDYNNRLRVLVATYVAFNPDGTELLVNMGGEQVYLFDLTNK
QKPYTFLLPKKCHSSTDLQNGKSTTNGVTNGIHLHSNGFRLSDAWSQSSVPYELPLHLER
LKQQANDAFSRQQWTQAIQLYSKTIQQAPGNPMLYGNRAAAFMKRKWDGDHYDALRDCLK
AISLNPSHLKAHFRLARCLFELKYVAEALECLDDFKGRFPDQAHSSACDALDRDIKAVLF
AKTDSSEEKKAGTTTPIRIRSSGRKDSISDDEVILRERGYDYKSRYCGHCNTTTDIKEAN
FFGSNGQYIVSGSDDGSFFIWEKETTNLVRVLQGDESIVNCLQPHPKHCFLATSGIDPVV
RLWSPRPESEDQNERVIEDMEGASQANQRRMNADPLEVMLLNMGYRITGLTNSGMASDDE
ENSEGQVQCRPS
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggagccgcttaacataaccagggacatcatccagcggcagataaaggagaagaacaca
ctacagtttgagcgtcgatatcatgtcattgatccattcataaagcggctgggcctggaa
tgtgagctggagggtcactctgggtgtgtgaactgtctggaatggaatgagaagggcgat
ttgctggcctcgggatcagatgatcagcatgccattctctgggatccctttagctgcaag
aaactgctgactatgcacactggacacacagccaacatattcacagtgaagttccttccg
cactcaaatgaccgcacgctgattactggggctgccgattccaaggtgcatgtccatgac
ttgactgtgaaggaaaccgttcatatgtttggcgagcacactaatcgtgtgaagcgaata
gcagctgctcccatgtggccaaacacattctggagtgcggcagaggacgggacagtccgg
cagtatgacctgagagagagcagcaagcgctcgcaggtactggtggaccttacggaatac
tgcgggcagcatgtggaagctaaatgcctagccattaatcctcagaacaataactacctt
gctgttggagcgagtggtccctttgtgcgagtttatgatgttcgcatgattcacaatcac
agaaaaacagtaaagcagagcttgacccctgggttgcacacattctgtgataggtacaag
tcagtgccagatggagctgttcagtattatgtggcaggtcatctcccagtgaaacagccc
gattataacaatcgtctccgtgtgctcgtagccacatatgtggcattcaaccctgatgga
actgaactcttagtcaacatgggaggggagcaggtctatttgtttgatctgacgaataaa
caaaagccctacacatttctgctacccaagaagtgccactcctctactgatttacagaac
ggaaaatcaacaacaaatggagttacaaatggaatccatctccacagtaatggcttcagg
ctgtcggacgcctggtcacaaagcagtgttccctatgagctgccacttcatctagagaga
ctcaagcaacaagcaaatgatgccttctcccggcaacaatggacacaggctatccaactt
tacagcaagaccattcagcaagctcctgggaatcccatgctttatggcaacagagcagca
gccttcatgaagcgcaagtgggatggagaccattatgatgccctcagagattgtttgaaa
gcaatttctttgaatccctcccacctgaaggcccatttccgcctggcacgttgtttattt
gagttgaagtatgtcgctgaggctctggagtgcctcgatgactttaagggccgttttcct
gatcaagcccacagcagtgcttgcgatgcactggatcgagacatcaaggctgtgctcttc
gcaaagactgacagctctgaagagaagaaggcaggaactaccaccccaatccgcatccga
tcaagcggcaggaaggattccatctccgatgatgaagtgattctgagggaacgaggttat
gattacaagtcacgatattgcggtcactgtaatactaccacagacatcaaagaagccaac
ttttttggaagtaatggccaatacattgtcagtggttcagatgatggatccttcttcatc
tgggagaaagaaacaacaaaccttgttcgtgttctacagggtgacgagtcgattgtgaac
tgtctgcagcctcacccgaagcactgcttcctcgcaacaagtggcattgatcctgtggtt
cgactctggagcccaagaccagaaagtgaagatcaaaatgagcgagtgattgaagacatg
gagggtgcttcacaagcaaaccagcgacgaatgaatgcagacccacttgaggtcatgctc
ctgaatatgggatacaggatcactggactgaccaacagtgggatggcctcagatgatgag
gaaaactctgaaggccaggtgcagtgccggccaagctaa
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