Scyliorhinus torazame (cloudy catshark): 140423147
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Entry
140423147 CDS
T11303
Name
(RefSeq) protein transport protein Sec23A isoform X1
KO
K14006
protein transport protein SEC23
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140423147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stoz04131
]
140423147
Membrane trafficking [BR:
stoz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
140423147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
APP_E2
Motif
Other DBs
NCBI-GeneID:
140423147
NCBI-ProteinID:
XP_072363855
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Position
1:302519098..302614685
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AA seq
781 aa
AA seq
DB search
MKWIEADFSQNTSVVMATYQEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPLACLFTPL
KERPDLPPIQYEPVLCSRATCRAVLNPLCQVDYRAKLWACNFCFQRNQFSPSYSGISEVN
QPAELLPQFSTIEYVVKRGTPAPLIFLYVVDTCLEEDDLQALKESLQMSLSLLPPNALVG
LITFGRMVQVHELNCEGISKSYVFRGTKDLTAKQIQDMLGLTKPPAPVQGRAPQPQEHPG
ISSRFLQPVQKIDMNLTDLLGELQRDPWPVSQGKRPLRSSGVAISIAVGLLEGSFPNTGA
RIMLFTGGPPTQGPGMVVGDELKAPIRSWHDIEKDNARYLKKATKHYEALANRAAVNGQC
IDIYACALDQTGLLELKCCCNLTGGYIVMGDSFNTSLFKQTFQRVFSKGLQGDFRMAFGA
TLEIKTTRELKIAGAIGTCVSLNSKGTSVSENELGVGGTCQWKICSLDPCTTLGIYFEVV
NQHNAPIPQGGRGAIQFVTQYQHSSGQRRIRVTTVARNWADAQSQLQQIEAAFDQEASAV
LMARLGVFRAESEEGPDVLRWLDRQLIRLCQKFGQFHKDDPDSFRLSETFSLYPQFMFHL
RRSPFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILYSYSFYGPPEPVLLDSSSILP
DRILLMDTFFQIVIYHGETIAQWRQAGYQDMQEYENFKQLLQAPLDDGQDILQTRFPMPR
YVDTEHGRSQARFLLSKVNPSQTYNNLYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSA
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggatagaagcagacttcagccagaacacctcagtggtcatggcaacatatcag
gaattcattcaacagaatgaagagcgtgatggtgttcggttcagctggaatgtgtggcca
tctagtcgactcgaggctacgcgcatggtggttcctttggcttgtctctttactccttta
aaagaacgcccagatcttccaccaatacagtatgaacctgtgctgtgcagcagggctacg
tgcagggctgtccttaaccctctgtgtcaagtggactacagagcaaaactatgggcgtgc
aatttttgtttccagaggaaccagttttcaccatcttactcgggcatttctgaagtaaat
cagccagctgaactattgccgcagttttcaactattgaatatgttgtcaagcgaggtacg
cctgcccctctcatcttcctgtatgtggtggacacttgcctggaggaagatgatcttcag
gccctcaaggagtccctacaaatgtccctgagtctgctgcctcccaatgcactagttggt
ttgattacatttggacgaatggtacaggtccacgaactgaactgcgaggggatttccaaa
agctacgtcttcagaggcacaaaggacctgacggcaaaacaaattcaggatatgttgggt
ctcacaaagccacctgcaccagttcaaggaagggcccctcaaccacaggagcatcctggt
atatccagcagattcttgcagcctgttcagaagattgacatgaatttgacagacctgctt
ggagaacttcagagggacccatggcctgtatctcagggaaaaagaccattgcgatctagt
ggcgtggccatatccatagctgttggtttgctggagggtagctttcctaacactggagct
agaataatgttgtttactggaggaccacctacccaggggcctggtatggtggtgggggat
gaacttaaagcacccattcgttcctggcatgatatagaaaaggacaatgccagatatctg
aagaaagcaactaagcactatgaggctctggcgaaccgtgcagcagttaacggacaatgc
attgacatctatgcttgcgccctggatcagactggtcttttggaattgaagtgttgctgc
aacctaactggaggttacattgtgatgggcgactccttcaacacttccctcttcaagcaa
acattccaaagggttttcagtaaaggcttgcaaggggatttcagaatggcatttggtgcc
actttagagattaagacaactcgagaactgaagattgctggtgcaattgggacctgtgtg
tctttgaactccaaaggcacttctgtgtctgaaaatgagctgggtgtaggtggtacatgc
cagtggaaaatttgcagtttagatccctgcactacactggggatctactttgaagtagtg
aatcagcataatgcaccaattcctcagggtggacgtggtgcgattcagtttgtcacccaa
taccagcattccagtggtcagagacgcatccgagttactacggtggccagaaactgggca
gatgcacagagtcaactccagcagatagaagctgcgtttgatcaggaggcatcagctgtg
ctgatggctagactgggggtttttagggctgagtccgaggaaggccctgatgtacttcgt
tggttggacagacaattgatccggctgtgtcagaagtttggccagtttcacaaagatgat
cctgactctttcagactttcagaaacattttccctttatccacagtttatgttccacctg
agaaggtccccttttcttcaagttttcaataatagcccagatgaatcatcatactaccgc
catcatttcatgcgacaagatctaacacagtctcttatcatgattcagcctattctttat
tcctactctttctatggaccacctgagccagtgcttttggacagtagcagcattttacca
gaccgaatactcctcatggacactttcttccagattgttatctatcatggagagactata
gctcagtggcggcaggctggatatcaagatatgcaggagtatgagaacttcaaacagctt
ctacaagctcccctggatgatggacaggacatccttcagactcgttttccaatgcctcgt
tatgttgacacagagcatggtcggagtcaggctcgattccttctatcaaaagtgaaccca
tcacagacttacaataatttgtatgcatggggacaggaatctggagcacctatcttgact
gatgatgtcagtcttcaagttttcatggaccatctaaaaaagctagctgtatcgagcgca
tcataa
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