Scyliorhinus torazame (cloudy catshark): 140424371
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Entry
140424371 CDS
T11303
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04517
IgSF CAM signaling
stoz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140424371 (sptbn1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140424371 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
stoz04812
]
140424371 (sptbn1)
Cytoskeleton proteins [BR:
stoz04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
140424371 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
140424371 (sptbn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
140424371
NCBI-ProteinID:
XP_072363961
LinkDB
All DBs
Position
1:complement(315882626..316252432)
Genome browser
AA seq
2360 aa
AA seq
DB search
MTAIATDYDNIDIQQQYSDVNNRWDVEEWDNENSSARLFERSRIKALADEREAVQKKTFT
KWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKALQ
FLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVESEDNKEKKSAKDALLL
WCQMKTAGYPNVNIHNFTTSWRDGMAFNAVIHKHRPDLIDFDKLKKSNAHYNLQNAFNLA
EQHLGLTKLLDPEDVSVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDYAIETE
KMIEKYESLASDLLEWIEQTINILNNRKFANSLVGVQQQLQAFNTYRTVEKPSKFTEKGN
LEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRTELIRQEKLE
QLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQAV
VAVAKELEAENYHDIKRITARKENVYRLWEYLLELLRARRHRLEMNLNLQKIFQEMLYIM
DWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQSDRVKVVNASAQKFASEGEGY
KPCDPQVIRDRVTHLDFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQIL
SSADYGKDLTSVIRLLSKHKAFEDEMSGRRGPLQQTIKEGEAMVAEEHFGSEKIKERIKD
IQEQWAHLEQLSAVQKKRLEEAANVHQFKADGDDIDVWMLDILRIVSSNDVGHDEYSTQA
LVKKHKDVGEEITSYRQIIDALHEQGRSLPDEYYKSPEIEGRLTDIEERYKELTELARLR
KQALQDALSQYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEMNNQ
ASRIAVVNQIARQLIHSGHPSEKEIKAQQDKLNTRWSQFRQLVDQKKDALNSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLTAIEAKLDDLQKEAER
LAAEHPDQAHAIMNRLAEINDVWEEMKCTLKNREESLGEANKLQQFLRDLDDFQSWLSKT
QTAIASEDMPNTLAEGEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNHLSQSHSYQLFLRDTKQAEGFLNNQEYVLAHTEMPTTL
EAAEAAIKKQEDFMTTMDANEDKINGVVETGRRLVSDGNIYSDKIQEKVDSIDERHKKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWISEKMLTAQDMSYDEARNLHSKWQKHQAFMA
ELASNKEWLDKIDKDGMQLTSEKPDTEVVVKEKLTALHHLWEELESTTQAKAQRLFDANK
AELFTQSCADFDKWLHNLEGQLQSDDYGKDLTSVSILLKKQQMLENQIEVRKKEVEELKG
QAKVLSQEGKDIDEVDSKRTIVEKRFLQLLEPLHERKNYLMASKEIHQFNRDLEDEILWA
EERMPLATSTDHGHNLQTVQMLIKKNQTLQKEIQGHKPRIDDIFERSQSMVTADSPSAKA
IQQRLSELQELWKLLSEETEKRHNRLVESHKAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVMMLKKHQILELAVEDYAETVHQLSKTSRALVADGHPESERISMRQSQVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDSVNRMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVEALQRMHTTFEHDIQALGTQVRQ
LQEDASRLQAAYAGDKADDIQKREAEVLEAWKTLLDACEARRAKLFDTGDKFRFFSMVRD
LMLWMEDVIRQIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTDKRKEMIDKWEDRWEWLRLVLEVHQFARDAGVAEAWLLGQEPYLSS
RELGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRRQEEEERKRQPSP
QPTPQPSDESESPLQEGAREGEHISQNGLPSDQESPRVSNTVVTSEMVNGATEQRTSSKE
PSPAASPTSDRKTKTSPLQSQSATLPVKSQETPSAQMEGFLHRKHEWETHNKKASSRSWH
NVYCVINNQEMGFYKDAKNASSGITYHGEVPISLKEALCEIAVDYKKKKHVFKLKLGDGN
EYLFQAKDDEEMNSWIQAITSAVTTDKSEAIPSSQSTPAASRAQTLPASVVLTGESSPGR
REKDKEKDKEKRFSLFSKKK
NT seq
7083 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaatagcaacagactacgacaacattgatattcagcagcagtatagtgatgtc
aacaatcgctgggatgtggaagaatgggataatgaaaacagctctgccaggctgtttgaa
agatcccgtattaaagccttggcagacgagcgtgaagctgttcaaaagaagactttcaca
aaatgggtaaactctcacttggcacgagtgtcttgcagaatcacagatttgtacacagac
ctccgcgatggccggatgctgatcaaattactcgaggtgttgtcaggagaaagacttcca
aaaccaacaaaaggacgaatgcgaatccattgtcttgaaaatgttgacaaagcccttcag
ttccttaaagagcaaagagtacatttagaaaatatgggatcccatgatattgtggatgga
aaccatcgactgactcttggtttaatttggaccatcattctccggttccagatccaagat
atcagtgttgaatcggaagacaacaaggaaaagaaatctgcaaaagatgccttgctgtta
tggtgccaaatgaaaacagcaggctaccccaatgtcaacattcacaactttaccaccagc
tggagggatggcatggcattcaatgctgttatacacaagcatagaccggacctgattgac
tttgacaagcttaagaagtcaaatgcacactacaatcttcagaatgctttcaaccttgca
gagcaacaccttgggcttaccaagctgctggaccctgaagatgtcagtgttgatcaccct
gatgaaaagtcaattattacttatgtggtgacatactatcattacttctccaaaatgaag
gcccttgctgtggaaggaaagcgtattggaaaggtgcttgactatgcaattgagaccgag
aaaatgatagaaaaatacgagtccctggcatctgacctgctggagtggattgaacagact
atcaacatcctgaacaatcgtaaatttgccaactcactggttggtgttcagcagcagcta
caagcatttaacacatatcgcacagtagaaaaaccatcaaagtttacagaaaaaggaaac
ctggaagtattgcttttcaccattcaaagcaagatgagagcaaacaatcagaaagtgtac
atgccaagagaaggcaaactcatctccgatatcaacaaggcctgggaacgactggaaaaa
gctgaacatgagcgagaactggcattaagaactgaactgatcaggcaagaaaagctggaa
caacttgcacgtcgatttgatcgtaaagccgctatgagggaaacctggctaagtgaaaat
cagcggcttgtttctcaggacaattttggttttgatctcccagctgtggaagctgctact
aagaagcatgaagctattgagacagatattgctgcatatgaagagcgggtgcaggcagta
gtggctgtggccaaggaacttgaagctgagaactaccatgacatcaagcgcatcactgca
aggaaagaaaatgtctacaggctgtgggaatacttactggaattactgcgagctcgtcgc
catcgtttagaaatgaatctcaacttacaaaagatttttcaggaaatgctgtatattatg
gactggatggatgaaatgaaggttctactgctgtcacaagactatgggaaacatttactt
ggtgttgaggatctcctgcagaaacatgcactggttgaagctgacattgctattcagtct
gacagagtgaaagttgtcaatgcatctgctcagaaatttgcttctgaaggagaaggttat
aaaccatgtgacccacaggtgattcgtgatcgtgtgactcacttggacttctgttaccaa
gagctctgtcagctggcagctgaacgaagagctcgtctggaagagtcacggcgcctctgg
aagttcttctgggagatggcagaggaagaaggctggatccgggagaaagagcagatactt
tcatcagctgactatggcaaggacctgactagcgtgattcgtctcctcagtaaacacaag
gcatttgaggatgaaatgagtggacggcgtggacctcttcaacaaaccataaaagaaggt
gaagcgatggtagctgaggagcactttggatcagagaagattaaggaaagaattaaagac
attcaggagcagtgggcccatcttgagcagctgtctgcagttcagaaaaagcgattagag
gaagctgctaatgttcaccagtttaaggctgatggtgatgatattgatgtgtggatgtta
gacattctgcggattgtctccagtaatgatgttggtcatgatgaatactccactcaagcc
ttagtgaagaaacacaaagatgttggtgaggagattactagctacagacaaatcattgat
gcactacatgaacagggacgaagtttgcctgatgagtattataaatcacctgaaatagaa
gggagattgactgatattgaagaacgttacaaggagttaacagaactggcacggcttcgt
aaacaagccctccaggatgcactgtcacagtacaagatgttcagtgaagcagatgcttgt
gaattatggattgatgaaaaggagcagtggctgaacagcatggagatcccagaaaaactt
gaagatctcgaggttatccaacataggtttgaaagtctggagccagaaatgaacaatcag
gcttctcgtatcgcagtggtgaaccaaatagctcgtcagttgatccacagtgggcatcct
agtgaaaaggagatcaaagcacaacaagataagctaaatacaagatggagtcaattccgt
caactagtggaccaaaagaaagatgcactcaattctgcactcagtattcagaactaccac
cttgaatgcaatgaaacaaaatcctggattagggaaaagaccaaagtcattgaatccacg
caagacctgggcaatgatcttgctggtgtcatggccctccaaaggaaattaactggaatg
gaacgtgatttgacagctattgaagctaaattagatgacctgcagaaagaagctgaaaga
cttgctgctgaacatcctgaccaggcacatgctattatgaaccgtcttgcagaaataaat
gatgtctgggaagaaatgaaatgtactttaaaaaaccgagaagaatcacttggtgaagca
aacaagcttcagcaattcctgcgcgatttggatgacttccaatcctggctatcaaaaacc
caaactgctattgcttctgaagatatgcccaacaccttggcagaaggagagaagctactt
acccagcacgaaaacatcaaaaatgaaattaataattatgaagaagactaccagaaaatg
cgtgacatgggtgagatggtaacgcagggacaaacagatgcacaatatatgttcctacgt
cagcgtctgcaggctttggatactggatggaatgagctgcacaaaatgtgggagaaccga
cagaatcacctatcccaatctcattcataccaacttttcttaagagatacaaagcaagca
gaagggttccttaacaaccaggagtatgtgctggcacacactgaaatgcccaccacacta
gaggctgctgaagctgccattaagaagcaggaagacttcatgacgaccatggatgcaaat
gaagataagatcaatggagtggtagagacgggcaggagactagtcagcgatggcaatatt
tattctgacaagatccaggaaaaagtcgactcaattgatgaaagacataagaagaaccgt
gaggctgccagtgaacttcttatgcgccttaaggacaatagagacctacagaagtttctc
caagactgccaggaattatccctttggatcagtgagaaaatgctcactgctcaggacatg
tcctatgatgaagccagaaatttgcacagcaaatggcagaagcatcaggcgtttatggca
gagcttgcatcaaataaagaatggctggataaaattgataaggatggaatgcagctaaca
tcagagaagccagatactgaggtggtcgtaaaagaaaaactgacagccctacaccatttg
tgggaagaattagaatctactacacaggccaaagctcaacgtctgttcgatgccaacaaa
gcagagcttttcacccagagctgtgctgatttcgacaaatggctgcataatctggaaggc
cagctccagtcagatgattatggcaaggaccttaccagtgtctctattctactcaagaaa
cagcagatgttagaaaatcagattgaagtgcgaaagaaggaggtggaggaactgaagggt
caggccaaggttttgagccaagaaggtaaagatattgacgaggtggatagcaagcgcaca
atagttgaaaaaagatttttgcagctactggaaccactacatgaaaggaaaaattacttg
atggcatctaaagaaatacatcaattcaacagagatctggaggatgagattttgtgggct
gaagaacgcatgcctcttgcaacatccactgaccatggtcacaacctccagactgtacag
atgctgatcaagaaaaaccagacccttcaaaaggaaattcaaggccataaaccacgtatt
gatgatatatttgagagaagccaaagtatggtaactgctgattccccaagtgcgaaggct
attcagcagagattatcagaattacaagaactttggaagttattgtctgaagaaacggag
aagcggcacaatcgtctggtggagtctcacaaagcccaacagtactattttgatgctgca
gaggcggaagcctggatgagtgaacaggaattgtacatgatgtcggaagagaaagcgaag
gatgagcagagtgcagtgatgatgttgaagaaacatcagattttggagttggcagtggaa
gattatgctgagactgtgcatcaactttcaaagacgagcagagctttggtagcagatgga
cacccagagagtgaacgtatcagcatgcgccagtcccaggtggacaagctttatgctggc
ttgaaagatttggctgaggagagaagagggaaactggatgagaggcaccgccttttccaa
ctaaacagggaggtggatgatttagagcaatggatagctgaacgtgaggtggtcgctgga
tcacatgaacttgggcaggactatgagcatgttacgatgttacaagagaggttccgtgaa
tttgcccgtgacactggtaatattggtcaggagcgagtcgacagtgtgaaccgtatggct
gatgagctgatcaactctggacattctgatgctgccacaattgctgaatggaaagatgga
ctcaatgaggcttgggcagatctccttgaacttattgacaccagaacacagattttggca
gcttcttacgaattgcacaaattctaccatgatgctaaggagatccttggacgaattcaa
gataagcacaagaaacttccagaggaattaggacgagatcagaacactgtggaagcattg
cagagaatgcacacaacatttgagcatgacattcaggctcttggtactcaggtaaggcag
ctgcaggaggacgcctctcgtctccaggctgcttatgctggtgacaaggctgatgacatt
cagaagcgtgaagcagaagtattggaggcatggaagactcttcttgatgcatgtgaggct
cggagggcaaagctttttgataccggtgacaagttccgcttctttagcatggtgcgtgat
ctgatgctttggatggaagatgttattcgacaaattgagacccaggagaaaccaagagat
gtttcatcagtggaattgttaatgaacaatcaccaaggcatcaaggctgaaattgatgcc
cgtaatgacagtttcacaacgtgcattgaacttggaaaatctctcctggcaagaaagcac
tatgcatctgaagagattaaggagaagttgttgcaactaacggataagaggaaagaaatg
attgacaagtgggaggacagatgggagtggctcagactagtattggaagtacatcagttt
gctagagatgcaggtgtggcagaagcctggcttttaggccaagagccatacctgtcaagt
cgagaattgggtcagagtgtggatgaggtggagaaactgattaagagacatgaggcattt
gagaaatcggcagctacgtgggatgaaaggttttcagcattggagcgactgacaacactg
gagttgcttgaagtacgtaggaggcaggaagaggaggagaggaagaggcaaccatcgcca
cagccaaccccacagccttctgatgagtctgaatcaccactgcaggaaggagctagagaa
ggagaacacatttctcagaatggattaccatccgatcaggaatccccacgggtatctaac
acagttgtaacaagtgagatggtgaatggcgccactgaacagagaactagttccaaagag
cccagtcctgcagcttcaccaacttcagatcgtaaaaccaagacctcacctttgcagtcc
caatctgctactttaccagtcaagtcacaagaaacgccgtcagcacagatggagggcttc
ctacatcgaaagcacgaatgggaaacacacaataaaaaagcatcaagcagatcttggcac
aatgtgtattgtgtgataaacaaccaggagatgggcttctataaagatgcaaagaatgca
agttcaggtatcacatatcatggtgaggtcccaattagcctaaaggaggcactgtgtgaa
atagctgttgactataagaagaaaaagcacgtctttaaactaaagttgggcgatggcaat
gaatatctcttccaagccaaagatgatgaggaaatgaacagctggattcaagctattact
tcagctgtgactacagataagagcgaggcaattccaagcagccagagtaccccagcagct
agccgtgcacagaccctgccagccagtgttgtgttgactggtgaatccagtcctggcaga
cgagagaaagataaagagaaagacaaagagaaaagattcagtctgtttagcaagaagaag
tag
DBGET
integrated database retrieval system
