Scyliorhinus torazame (cloudy catshark): 140424799
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Entry
140424799 CDS
T11303
Symbol
ube3c
Name
(RefSeq) ubiquitin-protein ligase E3C
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140424799 (ube3c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stoz04121
]
140424799 (ube3c)
Enzymes [BR:
stoz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
140424799 (ube3c)
Ubiquitin system [BR:
stoz04121
]
Ubiquitin ligases (E3)
HECT type E3
140424799 (ube3c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF3335
Motif
Other DBs
NCBI-GeneID:
140424799
NCBI-ProteinID:
XP_072364316
LinkDB
All DBs
Position
6:55578758..55856024
Genome browser
AA seq
1091 aa
AA seq
DB search
MFSFEGEFKTRPKVSLGGASRKEEKASLLHRTQEERRKREEERRRQRNAVIIQSFLRGYR
DRKQQHMIQRSEFDHYVSLVQPGGNFSIRDGQNLTLLIRKLLFFYKQNEDLDRLTWMCQN
LVKHSAQYVQQLADSNKQICLYQIKRLLGLYCRLLKSCDNESLNVTVPLRMLETFSSEKT
YLPVVQDANIVASLVEQILHYMVQKGYYKSLYMLINHRLPSSLEYSDASRISRVPLAIAL
LENFLKPLHFQYASCPEGSRHQVFAALAKEFFTAPFTDQIYNFLIPALSARVSFPYVPFL
SALLAPKATSSLGLTFSRDMAPWLLYFVLAVGESHIGILSEEGMLVYLRMLQILLPQLPV
SLIGSNGREIGSDSENEEEDERKMFTNKGDGRISVGLITAECLKKLDTKQQTNALLNLVW
KESVSEDVFTMMASICHTLMVQHRMMVPKIRLLYSLAFNARFMRHLWNLITSVTTKMITG
SMVSLLQLISRGSPMSLEDSHRIIPLFYLFSSLFSHSLISVHDNEFFGEQTQGGVDQQPP
TMMPFTLRELVTLSRCLRDACLGIIHLAYPETKPEVREEYMVAFKSIGVRTNTEMQQRIE
SERKRWIQLFKVISNLVKMLKSRDTRRQFCPPDHWLSDQVNIRADKVTQLYVPSARHVWR
MRRMGRIGPLQSTLDVGQEPAQLSVSEERHLAILTELPFVVPFEERVKIFQRLIFADKQE
VQGEGPFLDGINVTIRRNYIYEDAYDKLSPENESDLRKRIRVHLLNAHGLDEAGIDGGGI
FREFLNELLKTGFNPNQGFFKTTNEGLLYPNPAAKMLVGDHFTRHYYFLGRMLGKALYEN
MLVELPFASFFLSKLLGTSADVDIHHLASLDPEMYKNLLFLKSYEGDVEELGLNFTVVNN
ELGEAQVVELKLGGKDIPVTSANRIAYIHLVADYRLNKQIRPHCLAFRQGVANVVNLEWL
RMFDQQELQVLISGAQIPIDLEDLKNFTNYSGGYSADHAVIKIFWNVVESFTNDEKRKLL
KFVTSCSRPPLLGFKELYPAFCIHNGGTDLERLPTASTCMNLLKLPEFYDENLMRSKLLY
AIESAAGFELS
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgaaggcgagttcaaaacgcggcccaaggtatctcttggtggagcaagc
agaaaggaagaaaaagcttcgctactgcatcgaacgcaggaagaaaggcggaagcgagag
gaagaaagacgaaggcagaggaacgcagttattattcagtccttcctaaggggatatagg
gaccgaaaacagcaacatatgattcagcgaagtgaattcgaccattatgtctccttagtc
cagccaggaggaaatttttctatccgtgatggacagaatttgactcttttaataagaaaa
ctcctatttttttacaaacaaaatgaagatttggatagattgacatggatgtgtcaaaat
ttggttaagcatagtgctcagtatgtgcagcagctagctgattctaacaaacagatatgt
ttatatcaaataaaacggttattgggtttatattgcagattactgaagagctgcgacaat
gaaagtttgaatgttactgtgcctttgaggatgctggagaccttttcctcagaaaaaaca
tatttgcctgttgtacaggatgctaacattgtagcatcattggttgagcaaattttgcac
tacatggttcagaaaggttactacaaatcactttacatgttaattaatcataggcttcca
tcaagtttagagtattccgatgcttcacgtatttcacgtgttccgcttgcgatagcgttg
ttggagaatttcctgaaaccactgcactttcaatatgcctcctgcccagaaggttcgagg
caccaggtttttgctgcattggcaaaagaatttttcactgcaccattcacagaccagatc
tacaacttccttattcctgcattgtccgcaagagtctcctttccttatgtacctttcttg
agtgcattgttggctccgaaagcaacctcttcactgggactcactttttccagggatatg
gcaccttggcttctgtactttgttcttgctgttggagaatcacacataggaattctgtca
gaggaaggcatgcttgtgtacctgcggatgttgcagatccttttaccacagttaccagtt
tcattaattggttcaaatggcagagaaattggtagcgactcagaaaatgaagaggaggat
gaacgcaagatgtttaccaataagggcgatggtagaatttcagtaggtttaattactgca
gagtgtctcaagaagctggacacgaaacagcagacaaatgccttgttaaacctggtatgg
aaggaatctgtgagtgaagatgttttcacaatgatggcatccatctgccatacactgatg
gtgcaacacagaatgatggttccaaaaataaggcttttgtatagtttggctttcaatgca
cgattcatgcgacacctttggaatttgatcacatcagtaacaacgaaaatgatcacaggg
tctatggtatcattgcttcagttgatatcacgaggatctccgatgtcacttgaggactct
catcggatcatacctctcttttacctcttcagctccctcttcagccattctcttatttca
gtacatgacaatgaattttttggagagcaaacgcaaggaggtgtggatcaacaaccgcca
acaatgatgccattcactttaagagagttagtgacgttatcccgttgtcttcgggatgct
tgccttggaataattcatctggcatacccagaaaccaaaccagaagttcgggaggagtac
atggtagcgtttaagagtattggtgtccgaaccaatacagaaatgcaacaacgaatcgaa
tctgagagaaaaagatggattcagctttttaaggtgatctccaatttagtgaaaatgctt
aagtcaagagacacgagaaggcagttctgccctcctgatcactggctatctgatcaagta
aatatccgagcagataaggtcacacagctgtatgtgccctcagctagacatgtctggagg
atgcgtcgaatgggaaggataggaccattgcaatcaacactagatgttgggcaggagcca
gctcaattatcagtatctgaagaacgccatctcgctattttaactgaactaccttttgta
gttccgtttgaagaacgcgttaagatcttccaaagattgatctttgctgacaaacaggaa
gtacaaggggaggggccgtttttagacggaattaatgttacaattcgacgcaactatatc
tatgaagatgcatatgacaagctctcaccagaaaacgaatctgatctgagaaaaagaata
cgcgttcacttactaaatgcacacggtttagatgaagctggaattgatggtgggggaata
ttcagagaatttcttaatgaactgctcaagactggatttaacccaaaccagggatttttt
aaaacaacaaatgaagggcttctgtatccgaatcctgcagcaaaaatgctggttggcgat
cacttcaccagacattactactttctaggaaggatgttgggaaaggccctgtatgaaaac
atgctggttgaacttccttttgccagtttcttcctgtccaagctcctgggcacgagtgct
gatgtagacattcatcaccttgcatcattggatcctgaaatgtacaaaaatctgctcttt
ctaaagagctacgaaggtgatgttgaagaacttggactcaatttcacagtggtaaacaat
gagcttggagaggcacaggtggtggaactgaagctaggtggaaaggatattcccgtcacc
agcgcaaacaggatagcttatatccatcttgttgcggactacaggcttaacaagcagatc
cgaccgcactgtcttgcattccgacagggtgtggctaatgttgtgaacctagagtggctg
aggatgtttgaccaacaagagcttcaggttttgatatctggagcacaaataccaatagat
ctggaggatctcaaaaacttcacaaattattcaggtggttattcagcagaccatgcggtc
attaaaatattctggaacgtggtagagagtttcactaatgatgaaaagcgcaaattgctg
aagtttgtcaccagttgctcacgaccacctctgctgggatttaaggaactgtatccagcg
ttttgtatacacaatggaggaactgacctggagcgattacccacagctagtacttgcatg
aaccttctcaagcttccagagttttatgatgaaaatcttatgaggagtaaattactttat
gcaattgaatcagcagcaggctttgagctaagctga
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