Scyliorhinus torazame (cloudy catshark): 140425183
Help
Entry
140425183 CDS
T11303
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stoz04990
]
140425183 (snx13)
Domain-containing proteins not elsewhere classified [BR:
stoz04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
140425183 (snx13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rv2240c
ATPase_2
COX5A
Rep3_C
DUF6395
Motif
Other DBs
NCBI-GeneID:
140425183
NCBI-ProteinID:
XP_072365278
LinkDB
All DBs
Position
6:complement(186892567..187127973)
Genome browser
AA seq
966 aa
AA seq
DB search
MDVEVIAKAGVSIWGWGSLGVVLFLVTFGPFAIFYFAFYILCFLGGGFAVTLLFGKTNSE
KYLERCEHSFLPAAPTGVPRAVEEMKRESRQIKIDRRLTGSSIIDEPLQQVIQFALRDYI
QYWYYTLSEDDSFLLEVRKTLQNALVHFATRSKEVDWQPYFTTRLVNDFATHLRVFRKAQ
QRIEDLRPKKDGLEEFVEIFFEVEVEMEREVCRDLVCTSVKDEEGFLQDLCEILLYLFLP
PGDFHNKNMRYFLREILAKGILLPLINQLSDPDYINQYIIWLIRDANCNYEAFLNIIKLS
DRVVELEAVRDRAAEELQYLRSLDTAGDDISTIKNQINSLLFVKKVCETRVQRLNSGKEV
DTLKLAANFGKLCTIPLDSILMNNVALQFFMDYMQQTGGQAHLFFWLTVEGYRVTAQQQL
DVLRTVQKDGKRLSNQTKGLLRAAAVGVYDQYLSEKASPRVHVDDNLVAKLAEKLNYEDP
TPEIFDDIQRKVYEIMLKDEQFYPSFRQNPLYVRMLAELDMLKDPSIRGSDDGDLESFNG
SPTGSLNSSLDDLSNASSEETLQLLVSISDTVHADYEPYPVAGVCNDHGKTYALYAITVR
RRNPDGSEDVWKTYRRYSDFHDFHMRITEQFENLSSLLKLPGKRTFNNMDKDFLGKRKKD
LNTYLQLLINPEIIKACPALIPYVNDFLENKAYNKGKGDFARKMDTLVNPLRNSMRNVSN
VVKSIPDSLAEGMTKVSDNMDKLGHEIRHTFSKVPPLKPEEDSEYIRVSAQLDDYVDDNI
PLRVMLLLMDEVFDLKEKNHWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQVA
ETVKRFRDSFWPNGILAETAPRREKAIRMRSRVAAKTKMLVIMPDELKHIIGAETTRKGI
LRVFEMFQHSQLNRRLAHVFLEGFLETLFPQYKFRELFIKLHSRSSRMQKYKQKSQSVQI
ASSQKR
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggatgttgaggttattgcgaaggccggtgtttccatatggggatggggaagccttggt
gtcgttctttttctagtcacttttggacctttcgctatattttactttgcgttttatatt
ctgtgctttcttggtgggggttttgcagtcacactactttttgggaaaacaaactctgag
aaatatcttgaaaggtgtgaacattctttccttcctgcagcaccaactggcgttcccaga
gctgtagaagaaatgaaacgtgaaagtcgacaaataaagattgaccggcgactaactggt
tccagtataatcgatgaacctctacaacaggtcatccagtttgcactaagggactacatc
caatactggtattatactctaagtgaggatgattcttttttactcgaagtccgaaaaact
ctacaaaatgcacttgttcattttgccacaaggtcaaaggaggtagactggcaaccatac
tttactacgcggttggtaaatgactttgctacacatcttcgtgtattcagaaaagctcaa
caaaggatagaagatttaagaccgaaaaaagatggtttggaagagtttgttgaaatattt
tttgaggttgaagtggaaatggagagagaagtctgccgtgacctagtttgtacttcagtt
aaagatgaagaagggttcctgcaagatctttgtgagattttactgtatttgtttctacct
cctggagacttccataacaagaacatgagatatttcctaagggaaattttggcaaaagga
attcttcttccgttaatcaaccagctcagtgatcctgactacattaatcagtatattata
tggttgatccgtgatgccaattgtaattatgaagcttttttgaatattatcaaattaagt
gacagagttgtagaactagaagcagtgagagatcgagcagcagaggagctgcagtatctt
cgatctttagataccgctggtgatgatatcagcactataaagaatcagataaacagctta
ctgtttgtgaagaaagtttgtgaaacaagagttcagagattaaactcaggaaaggaagta
gatacactcaagcttgctgcgaactttggaaaactttgtacgattcccctagacagtatt
cttatgaacaatgtcgctttacaatttttcatggattatatgcagcagacagggggacag
gcacatctcttcttctggttaactgtggaaggatacagagtcactgcacagcagcagctg
gatgttttacgaactgtccaaaaggatggaaaaagactgagcaatcaaaccaaaggatta
ctgcgtgcagcagctgtaggtgtttatgatcagtatttgtcagaaaaggcatctccaaga
gtccatgtggatgataatttggttgctaaattggcagaaaaattaaattacgaggatccc
acaccagaaatatttgatgatattcaaagaaaagtctatgaaattatgctgaaggatgag
caattctacccctctttcaggcagaacccgctttatgtgcggatgttagctgagttggac
atgttgaaagatccaagtatcagaggctcagatgatggtgacttggagtctttcaatggc
tctccaactggtagtttaaattcgtctctagatgatctttcaaatgccagctctgaagag
actttgcaattgctagtatctattagtgacactgtccatgctgactatgaaccatatcct
gtggcaggagtgtgtaatgaccatggcaagacgtatgcactatatgcaatcactgttcgg
agaagaaacccagatggtagtgaggatgtgtggaagacctatcgccgctacagtgacttc
catgactttcacatgcggataactgagcagtttgaaaacctttcaagtttgctcaaactt
cctgggaaaaggacctttaataacatggataaagatttcttgggaaagcggaaaaaagac
ctcaatacgtacttgcagttgttaatcaatcctgaaataataaaagcttgcccagctttg
attccatatgtgaatgactttctggagaataaagcctataacaaggggaaaggagatttt
gctcgtaagatggacacgcttgtaaatccccttcgtaactcaatgagaaatgtttcgaat
gttgtaaagtcaattccagacagtctggcagaaggaatgacaaaagtatcagacaatatg
gataagttgggacatgaaattaggcatacgttttcaaaggttcctccattaaagccagaa
gaagatagtgaatatattcgtgtttctgcccagctggacgattatgttgatgacaatatt
cctctcagagttatgctgcttctcatggatgaagtatttgacttgaaggagaaaaaccac
tggttaagaagaaacatcaaaaacctgcttcagcagcttatccgagctacctatggagac
acgatcaacagaaaaattgtggatcatgttgattggatgacttcaccagagcaagttgca
gaaacagtgaaacgattcagagattcattttggcctaacggtatcttggcagagacagcc
ccacgcagggaaaaggcaataagaatgcgctcaagagtggcagctaaaactaagatgctc
gtgattatgccagatgaattaaaacatatcattggtgctgaaaccacacgcaaaggcatt
ttacgagtctttgagatgttccaacatagtcagttaaaccgaagattggcccatgtgttt
cttgaaggcttcctagaaaccctttttccgcagtacaagtttcgtgagctcttcatcaaa
ttgcattcacgatcatcacggatgcaaaaatacaagcagaagtctcagtcagtgcaaatt
gcttcctctcaaaagaggtga
DBGET
integrated database retrieval system
