Scyliorhinus torazame (cloudy catshark): 140425220
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Entry
140425220 CDS
T11303
Name
(RefSeq) protein PALS2-like isoform X1
KO
K28619
MAGUK p55 subfamily member 6
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
140425220
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
stoz04990
]
140425220
Domain-containing proteins not elsewhere classified [BR:
stoz04990
]
PDZ domain-containing proteins
MAGUK family proteins
140425220
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
L27
SH3_2
PDZ
SH3_1
PDZ_2
PDZ_6
PDZ_Tricorn
SH3_9
Motif
Other DBs
NCBI-GeneID:
140425220
NCBI-ProteinID:
XP_072365371
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Position
6:198211969..198385147
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AA seq
543 aa
AA seq
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MQQVLDNLNDLPISTGAKEIDLIFLKGIMESPIVRSLAKAHERLEETKLEAVRENNVDLV
KQILEDISCIVHHNETATELAKILKEPHFQSLLEAHDLVASKCYETPPSSPSLLNEILRN
QTASGDAVRMIGIQKKAMEPLGVTFRVENNELVIARILHGGMIDRQGLLHAGDIIKEVNG
REVGSDPKVLQEILKDCSGGITFKILPSYRDTPLPLQVFVKCHFDYNPANDSLIPCKEAG
LKFSRGDILQVVNREDLNWWQAYQMKGGGSAGLIPSQMLEEKRKAFVKRDWDLSGSNVPF
CGTIIGKKKKKMMYLTTKNAEFDRHEIMIYEEVARMPPFQRKTLVLIGAQGVGRRSLKNR
FIVMNSTRFGTTVPFTSRKPRDDELDGHAYRFVSRVEMEMDIKGSRYLEHGEYEGNLYGT
KIDSIHEVVSTERMCILDINPQALKILRTAEFMPYIVFVAAPELETLRAMHKAVIDAGIT
TKLLTDTDLKKTVDESARIQRAYSHYFDLTIVNDNLDKAFQKLQTAIEKLFIEPQWVPVN
WVY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaggtattggacaacctcaatgacttgcccatctctacaggagctaaggagata
gacctcatcttcctcaaaggaataatggagagtcctattgtcagatctcttgccaaggct
catgagcgactcgaagaaactaaactggaagctgtgagagagaacaatgtggaccttgtg
aaacaaattcttgaagacatcagttgcatagtccatcacaatgagactgccacagagttg
gccaagattctgaaggagccacactttcagtcacttttggaagctcatgatttggttgca
tcgaagtgttatgaaacaccaccctcaagccccagcctgctaaatgaaatcttgaggaac
cagacagcgtcaggagatgctgttcgtatgataggaattcaaaagaaggccatggagcct
ttgggtgttacctttcgggtggagaataatgaactggtaattgcaaggatactccacgga
ggtatgattgaccgtcaaggtcttctccatgcaggcgatatcattaaagaagtaaatggc
cgagaagtggggtctgacccaaaggtactgcaagaaatattaaaggattgcagcggaggc
atcacatttaagatcttgcccagctacagagatacacctttgcccctgcaggtgtttgtg
aaatgtcattttgattacaatccagccaatgacagcttaatcccctgcaaagaggcagga
ttgaagttttccagaggggacatccttcaagttgtgaatcgagaagatctcaattggtgg
caggcttatcaaatgaagggaggaggaagtgcaggtctaattcccagtcagatgttagaa
gaaaagaggaaagccttcgttaaacgagactgggatctttcaggttcaaatgtaccattt
tgtggaacaattattggtaaaaagaagaaaaaaatgatgtacctcacaaccaaaaatgca
gagtttgatcggcatgaaatcatgatctatgaggaagtagcaaggatgccaccttttcag
aggaagacgctggtgttgataggagctcaaggtgtgggacgacggagtttaaaaaacagg
ttcatcgtaatgaattccacgcggtttggaacaacagtcccatttacttcaagaaaacca
agagatgatgaactggatggacacgcctacagatttgtgtcaagggtggaaatggaaatg
gacataaagggcagcagatacctggaacatggggagtatgaaggaaatctctatgggaca
aagattgattcaatccatgaagttgttagtacagaacgaatgtgcattttggatattaat
ccacaggcactgaagatactgaggacagctgaatttatgccgtatattgtgtttgtcgct
gctcccgaattagaaacactacgtgccatgcacaaagctgtcattgatgctggaattaca
actaaacttctgacagatacagatttgaaaaagacagttgatgaaagtgctcgaattcaa
cgagcgtacagccactactttgatttgactattgtcaatgataacttggacaaagctttt
cagaagttacagactgcaatagagaagctctttatagaaccacagtgggtcccagtcaat
tgggtgtactag
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