KEGG   Scyliorhinus torazame (cloudy catshark): 140425353
Entry
140425353         CDS       T11303                                 
Name
(RefSeq) polyubiquitin-B
  KO
K08770  ubiquitin B/C
Organism
stoz  Scyliorhinus torazame (cloudy catshark)
Pathway
stoz03320  PPAR signaling pathway
stoz04120  Ubiquitin mediated proteolysis
stoz04137  Mitophagy - animal
stoz04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:stoz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    140425353
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    140425353
   04137 Mitophagy - animal
    140425353
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    140425353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:stoz04121]
    140425353
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:stoz04147]
    140425353
Ubiquitin system [BR:stoz04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   140425353
Exosome [BR:stoz04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   140425353
  Exosomal proteins of other body fluids (saliva and urine)
   140425353
  Exosomal proteins of colorectal cancer cells
   140425353
  Exosomal proteins of bladder cancer cells
   140425353
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 140425353
NCBI-ProteinID: XP_072365675
LinkDB
Position
1:146077..147995
AA seq 306 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGTC
NT seq 921 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaaccctgactggcaagaccataactcttgaggttgagcccagt
gacaccattgaaaatgtcaaggccaagattcaagataaagaaggcatcccacctgatcag
caacgtttgatctttgctggcaaacaactggaagaaggacgcaccctgtctgactacaac
attcagaaagagtcgactttgcatttggtactgcgtctcagaggtggcatgcagatcttt
gtgaaaactctgactggcaagaccatcacccttgaagtggagcccagtgacaccattgaa
aatgtcaaggccaagattcaagataaagaaggcatcccacctgatcagcaacgtttgatt
tttgcaggcaaacaactggaagatgggcgtaccctgtctgactacaacatccagaaagaa
tcaactttgcatttggtattgcgtctgagagggggcatgcagatctttgtgaaaactctg
accggcaagacaataactttggaggttgagcccagtgacaccattgaaaatgtcaaggcc
aaaattcaagataaagaaggcatcccacctgatcagcaacgtttgatctttgctggcaaa
caattggaagatggtcgcaccctgtctgactacaacattcagaaagagtcgactttgcat
ttggtactgcgcctccgaggtggcatgcagatctttgtgaaaactctgactggcaagacc
atcacccttgaagtggagcccagtgacaccattgaaaatgtcaaggccaagattcaagat
aaagaaggcatcccacctgatcagcaacgtttgatttttgcaggcaaacaactggaagat
ggtcgcaccctgtctgactacaacatccagaaagaatcaactttgcatttggtattgcgt
ctgagagggggcacttgttaa

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