Scyliorhinus torazame (cloudy catshark): 140425477
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Entry
140425477 CDS
T11303
Name
(RefSeq) E3 ubiquitin-protein ligase MARCHF6-like
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
140425477
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stoz04121
]
140425477
Enzymes [BR:
stoz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140425477
Ubiquitin system [BR:
stoz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
140425477
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
140425477
NCBI-ProteinID:
XP_072365892
LinkDB
All DBs
Position
6:complement(286284688..286404860)
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AA seq
980 aa
AA seq
DB search
MLATPPPPWRSESRGLERGSGPQSRGAARGAVAGEVSHRTAEGSSSSAGRGAANTARMES
TEEDICRVCRSEGTPDKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTP
IYSPDMPSRLPIQDIFAGLVTSIGTAIRYWFHYTLVAFAWLGVVPLTACRIYKCLFTGSV
SSLLTLPLDMLSTENLLADSLQGCFVVTCTLCAFISLVWLREQIVHGGAPQWLEQNQAQP
PNGVGQQNEPPAVPNAAAENPQVAQPANQAAENPAAADGGAPAEAENANIGVDEGENEDD
ENDDEDDAVVEDGADANNGAQDDMNWNALEWDRAAEELTWERMLGLDGSLVFLEHVFWVV
SLNTLFILVFAFCPYHIGHFSVVGLGFEEYVSTNDTVQASHFEGLITTIVGYVLLAMTLI
ICHGLAALVKFQRSRRLLGVCYIVVKVSLLVVVEIGVFPLICGWWLDICSLEMFDATLKD
RELSFQSAPGTTMFLHWLVGMVYVFYFASFILLLREVLRPGVLWFLRNLNDPDFNPVQEM
IHLPIYRHFRRFILSVIVFGSIVLLMLWLPIRIIKTLLPDFLPYNVMLYSDAPVSELSLE
LLLLQVVLPALLEQGHTRQWLKGLVRAWTVTAGYLLDLHSYLLGDQEENENNANQQANNN
QQARNNNAIPVVGEGLHAAHQAILQQGGPVGFQPYRKPLQFPLRILLLVIFMCVTLLIAS
LICLTLPVSAGRWLMSFWTGSAKIHELYTAACGLYICWLTIRAITVLAAWMPQGRDVIFQ
KLKEWSMMIVKTLVVALLLAGMVPLLLGLLFELVIVAPLRVPLDQTPLFYPWQDWALGVL
HAKIIAAITLMGPQWWLKTVIEQVYANGIRNIDLHFIICKLAAPVIAVLLLSLCLPYVIA
AGIVPLLGVTTEMQNLVQRRIYPLLLMVVILMGVLSFQIRQFKRLYEHIKNDKYLVGQRL
VNYERRTGKQTMTAPSPSEE
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atgttggccacccctccccctccctggcgcagtgagagccgcgggctcgagcgcgggagc
gggccgcagtcgagaggagccgcccgaggagcggtagccggtgaagtgagccatcgaacg
gccgagggctcctcctcctccgcaggccgaggagctgccaacaccgccaggatggagagc
accgaggaggatatatgccgagtatgtcggtcagaggggacaccagacaaaccactttac
catccttgtgtgtgcactggcagtatcaaatttatccatcaagagtgtttagttcagtgg
ctcaaacacagcagaaaggaatactgtgaactatgcaaacacagatttgctttcacacca
atttattctccagatatgccatctagacttccaattcaggatatttttgcaggattggtt
acaagtattggtacagcaataagatactggttccattacactttggtggcctttgcatgg
ctgggagttgtaccgctcacagcatgccgtatctacaaatgcttgtttactggctctgtg
agctcactgttgacactgccactagatatgttatccacggagaatctgctggcagactct
ttgcaaggctgttttgtggtaacatgcacactgtgtgcgttcattagcctcgtctggtta
cgagaacagatcgtgcatggtggagctccacagtggttagaacaaaatcaggcccaacca
cccaatggagttggacaacagaatgagcctccagctgttccgaatgctgcagctgagaat
ccccaagttgctcagccagccaaccaagcagccgaaaacccagcagcagccgatgggggt
gcccctgcagaagctgagaatgccaacattggggtagatgagggagagaacgaggatgat
gagaacgatgacgaagatgatgctgtggtagaagatggtgctgatgccaacaatggcgcc
caagatgacatgaactggaatgcgctagaatgggacagagctgcagaagaacttacatgg
gagcggatgcttggattggatggttcacttgtgttcctggagcatgtcttctgggtggtt
tcattaaacacactgtttattcttgtgtttgcattctgtccataccatattggacacttc
tccgttgttggtttgggttttgaggagtatgtaagtaccaatgatacggttcaagcctca
cactttgaaggcctgataacaacgatagtgggctatgttctgttggctatgactctaata
atctgtcatggcttggctgcactggtgaagttccaacgatctcgacgtttattgggcgtc
tgttatattgttgttaaggtgtccttactggtagttgtggaaattggtgtattccctctc
atatgcggctggtggcttgacatttgttcactggaaatgtttgatgctacgttgaaagac
cgagaactaagtttccagtctgcacctggaaccacaatgttcctacactggctggtgggg
atggtctatgtgttctacttcgcatctttcattcttctactccgagaggtcttgagaccc
ggtgtcttatggtttttaagaaatctgaatgatccagattttaacccagttcaggagatg
attcatctacctatttataggcatttcagacgctttatattgtctgtgattgtatttggg
tctattgtcctccttatgctttggttaccaattcgtattattaagactctactccctgat
ttcctaccatacaatgtgatgctttacagtgatgctccagtcagtgagctctctctggag
cttctgctactgcaggttgtattgccagccttactggagcagggacacacccggcaatgg
ttgaagggcctggtccgagcttggactgtcacagctgggtatttgctggacctccattca
tatttgcttggagaccaggaagaaaacgagaacaatgccaaccagcaggcaaacaataac
cagcaggctcgtaataacaatgccattcctgtagtaggagaaggacttcatgcagcccac
caggccatactgcaacagggtgggcctgtcggctttcaaccttatcggaaaccattacaa
tttcctcttcggattctgctgttggttattttcatgtgtgtgacgttgttgatcgccagt
ctcatctgtctcaccttaccagtttcagcagggcgttggcttatgtcattttggactggg
agtgccaaaatccatgagctgtatacagctgcatgtggattatatatctgctggttgact
atccgagcaattacagttctggcagcatggatgccacaagggcgagacgttatttttcag
aagctaaaggaatggtccatgatgatagtgaaaacattggtagtggccttgctgctggct
ggaatggttcctcttcttttaggacttctgtttgaattagttattgtagctccattaagg
gtacctctggatcagacaccactcttttacccatggcaggactgggctctcggtgttctc
catgccaaaataatagctgctataacactgatggggccgcagtggtggttgaaaactgtt
atcgaacaggtttatgcaaatggaattcgaaacattgatttgcattttataatttgcaaa
ctagcggcaccagttattgcggtgctgctgttatcactctgcctgccatacgtcatagct
gctggcattgtacccctactgggagtaactactgagatgcagaatctagtccagcgtcga
atttatccattgcttcttatggtggtgatattgatgggagtcctgtccttccaaattcgg
cagttcaagcgcctctatgagcatattaaaaatgacaagtacctcgttggtcaacgactt
gtgaattatgagcgaaggacgggtaaacaaacaatgacggctccatcaccttctgaggaa
taa
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