Scyliorhinus torazame (cloudy catshark): 140426150
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Entry
140426150 CDS
T11303
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
stoz03041
]
140426150
Spliceosome [BR:
stoz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
140426150
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GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_PARP14_3
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
140426150
NCBI-ProteinID:
XP_072366665
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All DBs
Position
7:37499336..37597961
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AA seq
558 aa
AA seq
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MDGILTDVTVGLKRGSDELSGTILSSSNSTMSSVVVTANGNDSKKFKGDDKMIGAPSRVL
HIRKLPSEVMETEVIALGLPFGKVTNILMLKGKNQAFLEMASEEAAITMVNYYTAVTPHL
RNQPIYIQYSNHKELKTDSALNQRAQAVLQAVTAVQTASTPLTGTTVSESAVTPAQSPVL
RVIIDNMYYPVTLDVLYQIFSKFGPVLKIITFTKNNQFQALLQYSDPMNAQQAKLSLDGQ
NIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPSGDGQSSMDPAIAAAFAKESSLL
GTPGGMMSGPYSGGSGYPSSMGFAQTAAVPGSLSPLAMPGAAAAAAAAAAGRVAMSGIAS
ANHSVLLVSNLNDEMVTPQSLFTLFGVYGDVQRVKILYNKKDSALVQMTDVNQAQLAMSH
LNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFTNSPLHRFKKPGSKNFQNIFPPS
ATLHLSNIPPSITEDNLEILFTNTGGKVKGFKFFQRDHKMALLQMCSVEEAIQALIDLHN
YDLGENHHLRVSFSKSTI
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattctcaccgatgttacagttggcctaaagcggggatctgacgaactttct
ggcaccattctcagcagctcaaactctaccatgagcagtgtggttgttactgctaatggc
aatgacagcaagaaatttaaaggtgacgataagatgattggtgcaccatctcgtgttcta
catattaggaaactgcccagtgaagtcatggaaactgaggtcatagctttgggcttgcca
tttggaaaagtcaccaacattctgatgttgaaagggaaaaaccaggctttcttggaaatg
gcttctgaagaggcagctatcaccatggtgaattactatactgcagtaacacctcatctt
cggaaccagcctatctatatccaatattcgaaccataaagaattaaagacagacagtgcg
ttaaaccagcgtgcccaagcagttcttcaggctgtaactgctgtgcagacagcaagtacc
ccgcttactggaactacagtcagtgagagtgcagtgacgccagcacagagcccagtactc
agagtaattattgacaacatgtactatccagtcactctggatgtactttatcagattttt
tccaagtttggtccagtattgaaaatcattacttttacaaagaataatcagtttcaagct
ctactgcaatattctgatcctatgaatgcacaacaagcaaaactgtctctggatggtcag
aacatttataatgcttgctgtactcttcggattgatttttcaaaactggtgaatttgaat
gtaaaatacaataatgataaaagtcgtgactacacccgtccagatcttccgtcaggagat
gggcagtcgtctatggatcctgccattgctgcagcatttgctaaagagagctccttgctt
ggtactccaggaggaatgatgtctggtccgtacagtggaggatcaggatatccaagttcc
atgggctttgcacagactgcagctgttccaggatccctgagcccattggctatgcctggt
gctgctgctgcagctgctgcagcagctgcagggcgtgtagcaatgtctggaattgcttct
gccaaccacagtgttcttttggttagcaatctaaatgatgagatggttacgccccaaagt
ctgtttaccctcttcggtgtttatggtgatgtgcagcgtgtgaagattttgtacaataaa
aaagacagtgctcttgtgcaaatgactgatgtcaaccaggcacaattggccatgagccac
ttgaatgggcagaaaatgtatggaaagattatccgggtcacgctgtccaagcaccagaca
gtacagctacctcgagagggcctagatgaccagggattgacaaaagattttaccaattcc
ccactccatcgtttcaagaaacctggatcaaagaatttccagaatatatttcctccctct
gctactctacatctttcaaatattccaccttcgattactgaagataatctcgagatactt
tttacaaatactggtggcaaagtgaaaggttttaaatttttccaaagagatcacaaaatg
gcactgctgcaaatgtgttctgtggaagaagccatccaggcactgattgatcttcacaac
tatgatcttggagaaaaccaccatctgagagtctccttctccaaatcaactatctga
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