Scyliorhinus torazame (cloudy catshark): 140427062
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Entry
140427062 CDS
T11303
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-2-like isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04080
Neuroactive ligand-receptor interaction
stoz04082
Neuroactive ligand signaling
stoz04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
140427062
04082 Neuroactive ligand signaling
140427062
04519 Cadherin signaling
140427062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
stoz04040
]
140427062
Ion channels [BR:
stoz04040
]
Ligand-gated channels
GABA-A
140427062
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
140427062
NCBI-ProteinID:
XP_072368631
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All DBs
Position
7:278892353..279070906
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AA seq
479 aa
AA seq
DB search
MKREMASRKINLQCPIASNNASYLRKVIFWTILIACLPSCSGKNEDEDYEDLILNKTWVL
TPKVYESDVTLILNNLLEGYDNKLRPDIGVKPTIIGTDMYINSIGPVNAINMEYTIDIFF
AQTWYDRRLKFNSTMKVLRLNSNMVGKIWIPDTFFRNSKKADAHWITTPNRMLRIWNDGR
ILYTLRLTIDAECQLQLHNFPMDEHSCPLAFSSYGYPKDEIIYQWARYHSIIFGEPRFWR
LYQFAFLGLRNTTDTVRTTSGEYVVMSVYFDLSRRMGYFTIQTYIPCTLTVVLSWVSFWI
NKDAVPARTSLGITTVLTMTTLSTIARKSLPKVSYVTAMDLFVSVCFIFVFAALIEYGTL
HYFVSNRKPSKDKDKKKKNRLLRMFSSKAPTVDIRPGSSAVQMNNASHLQERDEEYGYEC
LDGKDCTSFFCCFNECRTGAWRQGRLHIRVTKVDSYARIFFPTAFGLFNLVYWVGYLYL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagagatggcttcccgcaaaataaatctccagtgtcccatcgcgtctaataac
gcctcttacctcagaaaggtaatcttctggacaattctgatcgcctgtcttccatcctgt
tctggcaaaaatgaagatgaagactatgaagatttgatacttaacaaaacatgggtattg
actccaaaagtttatgaaagcgatgttactcttattttaaacaatttattggaagggtat
gacaataaactcaggcctgatataggagtgaagccaacaataattggtactgacatgtat
ataaatagcattggtccagtgaatgctatcaatatggaatataccattgacatatttttt
gcccaaacatggtatgacagacgtctcaaatttaacagcaccatgaaggttctcagactc
aacagcaacatggttggcaaaatatggataccggacacattctttagaaattctaagaag
gctgatgcacattggataacaactccaaatagaatgctcaggatatggaacgatgggaga
atattatacacactcaggttgacaattgatgccgaatgtcagcttcagctgcataacttc
ccaatggatgagcattcatgtcctttggcattctcaagctatggctatcccaaagacgaa
atcatataccagtgggcaagataccattctattatctttggagagccgcgcttttggagg
ctgtatcagtttgcatttcttggattgagaaatacgacagacactgtcagaacgacttcc
ggagagtacgttgtaatgtccgtgtatttcgatctcagcagacgaatgggctacttcacc
attcagacctacatcccttgcacattgactgttgtattatcctgggtatcattttggatc
aacaaggatgcagtaccagctagaacatcattaggcatcacaactgtcctgactatgact
acactgagcacgatcgctcgcaaatctctacccaaggtttcctatgtgaccgctatggac
ctctttgtgtctgtctgctttatctttgtgtttgctgcgctgattgaatatgggaccttg
cactattttgtcagtaacagaaagcccagtaaagacaaggacaagaagaagaagaatcga
cttcttcggatgttttcatcaaaggcgcctactgtggatatccgccctggatcatctgct
gtccagatgaacaatgcatcacacctacaagagcgggatgaagagtatggatacgagtgt
ttggatggcaaagactgcaccagtttcttttgctgtttcaatgagtgccgcacaggagct
tggaggcaagggaggctgcacatccgtgtcaccaaagtcgactcgtatgcccgtatcttc
ttccccacagcatttggtttatttaatctggtctactgggtaggctacctttatctgtaa
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