Scyliorhinus torazame (cloudy catshark): 140427759
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Entry
140427759 CDS
T11303
Symbol
runx1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
140427759 (runx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stoz03000
]
140427759 (runx1)
Transcription factors [BR:
stoz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
140427759 (runx1)
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GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
140427759
NCBI-ProteinID:
XP_072369489
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Position
8:complement(36308121..36576318)
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AA seq
475 aa
AA seq
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MASNSIFESFPSYQQCFMRDTNTSRRFTPPSTTLNTGKMSDSLPLAPPESALSKLRAADR
SMVDVLADHPGELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVLAGN
DENYSAELRNATAVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKIT
VDGPREPRRHRQKLEEQSKNASLAFSERLSELEQLRRSAMRLSPHHPTTAPNPRSSLHPT
TAFNPQAQSQIQDTRHIQPSPPWTYDQSYPYLGQISTPSIHPATPISPGRASGMPAITAE
LSSRLSGASDLTAFGDPRMSIDRQFSALPSLSDGRFTDPRMHYPGPFAYTPTPVTTSLGI
GMSAMTTAARYHTYLPPPYPGSAQGQTVPFQTSSSPYHLYYGTSAGSYQFSMMTGGDRSP
PRILPPCTNASTGSSLLNPNLPNQSDVVDADGSHSNSPTNMSTTGRLEEAVWRPY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaacagcatatttgagtcatttccttcatatcaacagtgcttcatgagagat
accaacaccagccgccggttcacgccgccctctaccacgctgaacacggggaagatgagc
gactcccttccgctggcaccgccggagagcgccctgagcaagctgcgagccgccgatcgc
agcatggtcgacgttttagccgatcatcccggagagctggtccggacggacagtccaaac
ttcctctgctccgtcctcccgactcactggaggtgcaacaaaaccctccccatcgcattt
aaggtggtcgccctgggggatgttcctgacgggaccctggtcacggtcctggccggcaac
gacgagaactattcggccgagctgcggaacgccacggcggtcatgaaaaaccaggtggcc
cgcttcaacgacctgcgattcgtcggacggagtggccgaggtaaaagtttcacgttgacc
atcacagtgtttacaaacccgcctcaagtagccacttatcacagagccatcaagatcacc
gtggatggacccagggaaccaagaagacatagacagaagttggaagagcagagtaaaaat
gccagcctggccttctcagaacgcctcagtgaattagagcagctacgtcgctcggccatg
aggctcagccctcatcaccccactaccgctcccaacccgcggtcctcactgcaccccaca
accgcctttaaccctcaggcacagagccaaattcaagataccagacacatacaaccttcc
ccgccatggacctacgaccagtcgtacccctatcttggccagatctcgacaccctccatt
catcctgcgacacccatctcccccgggcgagcaagtgggatgccggcaatcacagcagaa
ctttccagcagactttcaggtgcctctgatctaacagcatttggtgacccaagaatgagc
attgaccgccaattctcagcccttccttctctctctgatggtcgcttcacagaccctcga
atgcactacccaggaccttttgcgtacacacccactcctgtcactactagcctaggaatt
ggcatgtccgctatgacaactgcagcacgctaccacacgtacctgcctcccccttaccca
ggctctgcccaaggtcaaactgtacccttccagaccagctcttctccttaccacctgtac
tatggcacttcggctgggtcctaccagttttctatgatgacggggggagaccggtcacca
ccccgcattctaccgccctgcactaatgcatcaacaggatccagcctcctcaacccaaac
cttcccaatcaaagcgatgttgtggacgcagacgggagccacagcaactcaccaacaaat
atgagcaccacagggaggctggaggaagcagtctggcggccgtattga
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