Scyliorhinus torazame (cloudy catshark): 140427961
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Entry
140427961 CDS
T11303
Symbol
usp9
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 9X
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
stoz01002
]
140427961 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
stoz04121
]
140427961 (usp9)
Enzymes [BR:
stoz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140427961 (usp9)
Peptidases and inhibitors [BR:
stoz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
140427961 (usp9)
Ubiquitin system [BR:
stoz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140427961 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140427961
NCBI-ProteinID:
XP_072369964
LinkDB
All DBs
Position
8:complement(77775631..78218140)
Genome browser
AA seq
2546 aa
AA seq
DB search
MTATTRGSPVGGNDNQGQAPDGQSQPPLPQNQTSSPNTSSENSPVSPPDEQGQGDAPPQL
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKSLDIKSEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLIELCVAKLSQDWFPLLELLAMALNP
HCKFHIYNGTRPSETVPAGVQLAEDELFARPPDPRSPKGWLVDLINKFGTLNGFQILHDR
FVSGSALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHGSPEEEEWLTAERMAEWIQQNNILSIVLRDSLHQPQYVEKLEKILRFV
IKEKALTLQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNAS
KKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSC
SQDRDTQKIQWIDRFVEELRTNDKWVIPALKQIREICSLFGEAPQNLSQTQRSPHVFYRH
DLINQLQHNHSLVTLVAENLSAYMENIRQFHKENPEYDPQTVRTGSRYSHVQEVQERLNF
LRFLLKDGQLWLCAPQAKQIWKCLAENAVYLCDREACFKWFSKLMGDEPDLDPDINKDFF
ENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLELIGLEYLWRVVIQ
GSDDIASRAIDLLKEIYTNLGPRLQVNQVEIHEDFIQSCFDRLKASYDTLCVLDGDKDSI
NCARQEAIRMVRVLTVLREYINECDSDYHEERTILPMSRAFRGKHVSLVVRFPNQGRQVE
DLDIWSHTNDTIGSVRRCILSRIKANSAHTKVELFIGGELVDPADDRKLIGQLNLKDKTL
ITAKLTQISSNMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLPGVIMSLHPRYISF
LWQVADLGSSLNMPQLRDGARILMKLMPPDNTTVEKLRAICLDHAKLGESSLSPNLDSLF
FGQSASQVLYLTEVVYALLMPASAPLGEDASEFQYNFLKSGGVSLVLGILTRNNFLLNAD
METRRAAYLNALKIAKLLLTAVGFGHVRAVAEAFQPVVEGSSTVSPINHATHSQAVVLQN
ALHNIPNPTSECMLRNVAIRLAQQISDEASKYIPDICVIKAVQKIIWASGCGSIQLVFSS
SEDVSKIYEKTNAGNEPDSEDEHVCCEALEVMTLCFALVPTALDTLSKEKAWQTFIIDLL
LHCHSKAVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVLASTARERAKHSADYFTLLR
HLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTSETGVEETILEGHLGVTKELLAF
QTPEKKYHIGSEKGGANLIKELIDDFIFPASNVYLQYKKSGELPSEQAIPVCSAPAAINA
SFELLVALAVGCVQNLKQIVDTMTDMYYAGCEALTEWEYLPPVGPRPSKGFVGLKNAGAT
CYMNSVIQQLYMIPAIRNGILTIEGTGSDVDDDTSGDEKQDNESNVDPRDDVFSYHHHYD
KPVVGKTEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGFWKQFRLWGEPVNLREQHDA
LEFFNSLVDSLDEALKALGHATMLSKVLGGSFADQKICQGCPHRYECEESFTTLNVDIRN
HQNLLDSLEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIKKLPPVLAIQLKRFDYDWER
ECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDINPENQLIQNDQPDNEQPGSTKYRLVG
VLVHSGQASGGHYYSYVIQRNGGDGEKNKWYKFDDGDVTECKMDDDEEMKNQCFGGEYMG
EVFDHMMKRMSYRRQKRWWNAYILFYERMDTIEKDNELIKYISELEISIKPHQIKMPSVI
ERSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNPPPGQDHLLPEAEELAMISIQL
AARFLFNTGFHTKKIVRGPASEWYDALCILLRHSKNVRCWFAHNVLFAYPNRFSEYLLEC
PSTEVRSAFAKLIVFIAHFSLQDGPCPSPFASPGPSTQAFDNLSLSDHLLRAVLNLLRRE
VSEHGRHLTQYFNLFVMYANLGVAEKTQLLKLNVPATFMLVALDEGPGPPIKYQYAELGK
LYAVVSQLVRCCDVSSRMQSSINGNPPLSNPYGDPNLSQPIMTIQQSVADILFVRTSYVK
KIIEDCSNSEETIKLLRFCCWENPQFSSTVLSELLWQVAYSYTYELRPYLDLLLQILLIE
DSWQTHRIHNALKGIPDDRDGLFDTIQRSKNHYQKRAYQCIKCMVALFSSCPVAYQILQS
NGDLKRKWTWAVEWLGEELERRPYPGNPQYTYNNWSPPVQSNETSNGYFLERSHSARMTL
AKACELCPEEEPDDQDAPDDHDSSPPEDAPLYPHSPNSQYQQNNHLHGQPYTGPVAHHMN
NPQRTGQRAQENWEGSEDIPASQAKD
NT seq
7641 nt
NT seq
+upstream
nt +downstream
nt
atgacagccacgacccgtggctctcctgtaggagggaatgacaaccagggccaggcgcct
gatggacagtcccagcctcctctcccacagaatcagacctcctctcccaatacatcaagt
gagaactcaccagtgagcccccctgatgagcaaggtcagggtgatgctcctcctcaactc
gaggaggaggagccggcatttcctcatacagatttggcaaagctggatgatatgattaat
agaccacgttgggtagttccagtgttgcctaaaggtgaattagaagttctactagaagct
gctatagatcttagtaaaaaaagtcttgatattaaaagtgaagcatgtcaacgatttttc
cgtgatgggctcacaatttccttcacaaaaattctaactgatgaggctgtgagtggttgg
aaatttgagatccatagatgtattataaataatactcatcgcctcatagaactgtgtgtg
gccaagctgtcccaggattggtttccccttcttgaactccttgccatggccttaaatcct
cactgcaaatttcatatctacaatggtacacgcccttctgagactgttcctgcaggagtc
cagctggctgaagatgaactctttgctcgaccacctgacccacgctccccaaagggttgg
cttgtggatcttatcaacaaatttgggacattgaatggatttcagattctacatgatcga
tttgtcagtggttcggcattaaatgttcagataattgcagcactcatcaaaccttttgga
cagtgttatgaatttcttaccttgcatacagtgaagaaatacttccttccaataatagaa
atggttccgcagtttctagaaaatctaacagatgaggagctgaaaaaagaagcgaagaat
gaagccaaaaatgatgctttatctatgataattaaatcactgaaaaacttagcttcacgg
gttcctgggcaggaggaaacggtcaaaaatctagaaatatttaggttaaaaatgatacta
aggttgttacaaatttcatcttttaatggaaaaatgaatgcactaaatgaagttaacaag
gtgatttctagtgtctcttattatacgcatcgccatggcagtcctgaagaagaagaatgg
ttgacagcagagagaatggcagagtggattcaacaaaacaacatattgtcaattgtattg
cgtgacagtctacaccaaccacaatatgttgaaaaactagagaagatacttcgcttcgta
attaaagaaaaagcactcaccctccaagaccttgacaacatttgggcagcacaggctggt
aaacatgaggcaattgtgaagaatgtccatgatcttcttgcaaaattggcatgggatttt
tctcctgaacagcttgaccacctttttgattgtttcaaggcaagttggacaaatgcaagt
aaaaagcaacgtgaaaagctattagagttaatccgtcgccttgctgaggatgacaaagat
ggcgtgatggcacataaggtgttaaacctcctatggaatttagcacatagtgatgatgta
cctgttgacatcatggaccaggctttaagtgcacacatcaaaatcctggattatagctgc
tctcaggaccgagacactcagaagatccagtggatagatcgtttcgtggaggaactacgt
acgaatgacaaatgggtcattcctgctttgaaacaaattagggaaatctgtagtctgttt
ggagaagcaccacagaatttaagccagacccaaagaagtcctcacgtgttttatcggcat
gacttgattaaccagcttcaacacaatcattcattggtcaccttggtagctgaaaacctc
tctgcctatatggagaatatacggcaatttcataaagagaacccagagtatgatccacag
actgtaaggacaggaagtcgatatagccatgttcaagaagtccaagagagactaaatttc
ttgagatttttattgaaggatggccaactgtggctgtgtgctcctcaagccaagcaaatc
tggaagtgtttggctgagaatgctgtctacctttgtgatcgtgaggcctgtttcaagtgg
ttttctaagttgatgggagatgagcctgacttggacccagacataaacaaggacttcttt
gaaaataatgttttgcaattggatccttctctcttaactgaaaatggaatgaagtgcttt
gaacggtttttcaaagctgtgaactgtcgggaagggaaacttgtagcaaaacggcgtgct
tatatgatggacgatcttgagttaataggactggagtacctttggagggttgtaattcaa
ggaagtgatgacattgccagtagagcgatagacctgctaaaagaaatatacacaaatctt
ggcccaagattgcaggttaaccaggtagagattcatgaagacttcattcagtcatgtttt
gatcggctgaaggcatcttatgatacgctgtgtgtactagatggtgacaaagacagtatt
aattgtgcaaggcaagaggcaatacggatggtacgtgtattgacagttttgcgtgagtac
ataaacgaatgcgacagcgactaccatgaagaaaggactattctaccaatgtctagagct
tttcgtggaaaacatgtatcacttgttgtacggtttccaaatcaaggacgccaagtggaa
gatttggatatttggtctcacacaaatgacaccattgggtctgtgaggcgctgtatcctc
agtagaataaaagcgaacagtgcacatacgaaagtagaattgtttattggtggcgaactt
gtagaccctgctgatgatcggaaattaattgggcagttaaatcttaaagataaaacactt
attacagccaagctgacgcagatcagttcaaatatgccttcaagccctgatagctcttcg
gattcttcgacgggctccccaggaaaccatggtaaccactacagtgatggtccaaatcct
gaggtagaaagctgtttacctggagtgataatgtccttacatcctcgatacatttccttt
ctttggcaagttgcagatctgggcagcagcctaaacatgcctcagttgagagatggcgct
cgcatccttatgaagctcatgcctcctgataacactacagtagaaaaacttcgtgctatt
tgtttggatcatgcaaaacttggtgagagcagcctcagtccaaaccttgactcacttttt
tttggacaatctgcctcacaggtgttatacttaactgaggtagtgtatgctttattaatg
cctgccagtgcacctctgggagaagatgcaagtgaattccaatacaactttttaaaaagt
ggtggtgtatcccttgttctgggaatactaaccaggaataacttcctgctaaacgcagac
atggagacacgaagggctgcatatctgaatgcactaaaaatagccaaattattgctcaca
gcagttggatttggccatgttagagctgtggcagaagcatttcaaccagttgtagaaggt
tcaagcactgtttcaccaataaatcatgctactcatagccaggctgtagttctacagaat
gctttgcataacattcctaatcctacttcagaatgtatgttgcgaaatgtagccattcgc
ctggcacagcagatttcagatgaggcttcaaaatatatcccagacatttgtgttattaaa
gcagtgcagaagattatctgggcctcgggttgtggttcaatacagcttgtgttcagttca
agtgaagatgttagcaagatctatgaaaaaactaatgcaggaaatgaaccagattctgaa
gatgaacatgtttgctgtgaagcactggaggtgatgacactgtgctttgcactggttcca
acagcactggatactctcagtaaagaaaaggcatggcagaccttcataattgatttgcta
ctgcattgtcacagcaaagcagttaggcaaatggcccaagagcagtttttcctgatggct
accagatgctgtatgggacatcgacctctactgttcttcattactcttctcttcacagta
ttagcaagtactgcaagagagagagcaaaacattcggcagactacttcacactattgagg
catctgcttaactacgcgtacaacagtaacattaacctgcccaatgcagaagttctgctc
aacaatgaaattgactggctcaagaggattagagatgaagtgaaaagaacaagtgaaacc
ggtgttgaagaaacaattctcgagggtcaccttggagtcaccaaagagctactggcattc
cagacgcctgaaaagaagtaccatataggctcagagaaaggcggagccaatctcattaag
gaactgatcgatgacttcatcttcccagcgtctaatgtttacctacagtataagaagagt
ggggaattaccatctgagcaagccattcctgtctgtagtgcacctgctgcaattaatgct
agctttgagttgttagtggcactggctgttggatgtgtgcaaaacctcaaacaaatagtg
gacaccatgacagatatgtattatgcaggttgtgaagcactgactgagtgggaatacttg
ccaccagtaggaccgcgtccatcaaaaggatttgtaggattaaagaatgctggggctacg
tgttacatgaattctgttattcagcagctgtacatgataccagctattagaaatggtatc
cttacaattgaaggcactggtagtgatgttgatgatgatacatctggtgatgagaaacag
gataatgagagcaatgttgatcctcgggatgacgtttttagttaccaccaccattatgac
aaacctgtagttggaaaaactgaagatcgaaaggaatacaatattggggtcctgagacat
ctgcaggtcatttttggacatctggctgcctctaggttacaatactatgtgcctagaggg
ttctggaagcagttcaggctttggggtgaaccagtcaaccttcgagagcaacatgatgct
ttggaattcttcaactctttagtggacagcctggatgaagctttgaaagcacttggacat
gcaactatgctcagcaaagttcttgggggttcctttgctgatcagaagatttgtcaagga
tgtcctcacagatatgaatgtgaggaatccttcacaacactgaatgttgacatcagaaat
catcaaaatctacttgattcacttgagcaatatgtcaaaggagacttattggagggtgcc
aatgcataccattgtgagaaatgcaacaaaaaggtcgacacagtgaagcggttgctaata
aagaagttgccaccagttttagcaattcagctgaaacgatttgactatgactgggagaga
gaatgtgcaattaagttcaatgactattttgagtttccacgagagctggatatggagcct
tatactgtggccggcgtagccaagttggaaggggatgacatcaacccagaaaatcagttg
atccaaaatgaccagccagataatgaacagcctgggagcactaaatatagactagttggt
gtgttggtgcatagtggtcaggccagtggtggacattactattcgtacgtcattcaacga
aatggaggagatggtgagaaaaacaaatggtataagtttgatgatggtgatgtaactgag
tgcaaaatggatgatgacgaagagatgaagaaccagtgctttggtggcgagtacatgggt
gaggtctttgaccacatgatgaaacgcatgtcatacagaaggcaaaaacgatggtggaat
gcctacatacttttttatgaacgtatggacacaatagaaaaagataatgaattaattaag
tacatttctgagctggagattagcataaaaccacaccagataaagatgccaagtgtcatt
gaacgaagcgtacgaaaacaaaatgtgcagttcatgcacaacagaatgcagtatagtctg
gagtattttcaattcattaagaaactactgacttgtaacagcgtctacctgaaccctcca
cctgggcaagatcatctgttaccagaagctgaagaattggcaatgataagtattcaactt
gctgctagattcctgtttaatactgggtttcacacaaagaaaatagtccgtggtccagca
agtgaatggtatgatgcattgtgtatcctgctccgtcacagcaagaatgtacgctgttgg
tttgcacacaatgttctttttgcctacccgaatcgcttctctgagtaccttttggaatgc
cctagcacagaagtgaggagtgcttttgctaagctcattgtatttattgcacatttctca
ttgcaagatggaccatgcccttccccttttgcatccccaggaccttccactcaggctttt
gataatttaagtctaagtgaccaccttctcagagctgttctgaacctactacgacgagag
gtatctgagcacgggcggcacttgacacagtacttcaacctctttgttatgtacgccaat
ctgggtgtggctgagaagacgcagttactaaaactgaacgtgcctgccacgtttatgctt
gtagctttggatgaaggcccaggaccacccatcaaataccagtatgctgaactgggtaaa
ctctacgctgtggtgtcacagttagttcgttgctgtgatgtatcatcacgcatgcagtcc
tcaattaatggaaatccacccttatcaaatccctatggtgatcctaacttgtcccaacct
ataatgactatccagcagagtgtggcagacatcctgtttgtacgaactagttacgtgaaa
aaaattattgaagactgcagcaattctgaagaaaccatcaaactacttcgcttctgttgc
tgggaaaatccacagttctcttccactgtgctcagtgaactcctctggcaggtggcatat
tcttatacctatgaacttaggccttatttagatcttctactacaaatattgctaatagaa
gactcttggcaaacccacagaattcataatgccctgaaaggaattcctgatgaccgagac
gggctgtttgacaccatccagcgttctaaaaatcactatcagaagagagcataccagtgt
attaaatgcatggttgctctcttcagctcatgtcctgtagcctaccagattctccagagt
aatggggatctgaaaaggaagtggacctgggctgtagagtggcttggagaagagctggaa
cgtaggccatatcctggaaatccacaatatacctataacaactggtcaccccctgtacag
agcaacgaaacatcaaatggttacttcctggagaggtcgcacagtgccaggatgactctt
gcaaaagcatgtgagctatgtccagaagaggagccagatgatcaagatgcaccagatgat
catgattcttccccaccagaagatgctcctttataccctcattcaccaaactcccagtat
caacagaataaccatttgcatggacagccatataccggtccagtggcacaccatatgaac
aaccctcagcgaacaggtcagcgagcacaagaaaattgggaaggcagtgaagacattcct
gcgtcacaggcaaaagattaa
DBGET
integrated database retrieval system
