Scyliorhinus torazame (cloudy catshark): 140428122
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Entry
140428122 CDS
T11303
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
stoz03036
]
140428122 (sbno1)
Chromosome and associated proteins [BR:
stoz03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
140428122 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
140428122
NCBI-ProteinID:
XP_072370341
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Position
1:4410219..4684390
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AA seq
1359 aa
AA seq
DB search
MTDPGQDLLLAALSESGISPNDLFDADPLDTGLMSPLPSSGIQQPPTATTFVLNQLNQLP
NLGTTLIVTKAPANAVSRPTVSVAKVVQTSSLTLSSTAAPTVATASTKDQIQLKDLLKSN
SLSELMKMKPPSNIVQPITTAAKIVLLTSKMMNKPADLNNGVVRKESLSKEVTRIWVNED
IKMRSFSPTPKLPLKDEDEPEEEDDEELGHADTYAEYMPMKLKVGLRHPDPVVETSSLSS
VTPPDVWYRLTLQEETIDSGWLSALQLEAITYAAQQHETFLPNGDRAAFLIGDGAGVGKG
RTIGGIIFENYLLGRKRSLWFSVSNDLKYDAERDLRDIGAKNIQVHALNKFKYGKISSKQ
NGSVKKGIIFATYSSLIGESQSGGKYRTRLKQLLHWCGEGFDGVIVFDECHKAKNLSPVG
SSKPTKTGLAVLELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGEGTPFKEFGDFIQ
AVERRGVGAMEIVAMDMKLRGMYIARQLSFSGVTFKIEEVPLSQDYIKMYNKAVKLWVEA
REKFQMSAELIDAEQRMKKSMWGQFWSAHQRFFKYLCIASKVRRIVQLAREEIKNGKCVV
IGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQSLVEKHFPAPDRKKLYSLLGIDMSVS
SNHDSPIDSPSRQSKGKKRKANEDKREAKKPRKSKGLAGSSSSETESEVSESEGSDEESF
LSVSSGDDDFNPFRDESSNEEDDPWLVRKDRKKDKDKKKKKKSIDPDSIQSALLASGLGS
KKTSFSTITISSTTNNALPSGNSSHSIVASQDAVERAQQMKRELLEKLERFAEDLPPNTL
DELIDELGGPDNVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNITEKQRFMNGEKN
IAIISEAASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTSPEYVF
LISELAGEQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIV
NLDSPLVSAPKDYLGDFFKDVRQGLIGVGLINVEDRSGLLTLDKDYNNIGKFLNRILGME
VHQQNALFQYFSDTLSAVIQNAKKNGRYDMGILDLGSGDEKVKKLETKKFLTPGYSVSGH
VEIYTISVERGMSWEEATKIWAEQMGTDDGFYLSMQIRNNKKTAILVKEVNCKKRLFMMF
RPNTGKQLKLENYIDLKKKYKKVASGEAETHWLEQYKSSADTCTHAYWRGNCKKVSLGMV
CEIGLRCRTYHVLCGSVLSVWTKVEGVLASVSGTNVKMQIVRLKTEDGQRIVGLIIPQNC
VSPLMNILSTSDQSQQLALQQQQMWQQLHPQSMSHMCNT
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgacagacccaggtcaagatcttctgcttgctgctttgagcgaaagtggaattagccct
aatgatctcttcgatgcagatccacttgacactggcttgatgtcacctctgccatccagt
ggcatacaacagccaccaacagctaccacttttgtgctaaatcagctgaatcagctgcca
aacctgggaacaacattaattgtgacaaaggcacctgctaatgcagtgtctcgccccaca
gttagtgtagcaaaagttgttcagaccagctcacttacactatcatctacagctgctcca
actgtagccacagcatcaaccaaggatcagatacagcttaaagacttacttaaaagcaac
agcttgtctgaactgatgaaaatgaagccaccgtccaacattgttcagcccattacaaca
gcagccaaaattgtactgctcacttctaagatgatgaataaaccagctgacttgaacaat
ggtgttgtaaggaaggaatcattgagtaaagaagtgactcgaatatgggtcaacgaggat
atcaaaatgcgaagcttttctccaaccccgaaattgcctctgaaagatgaagatgagcct
gaggaggaagatgatgaggaacttggccatgcagacacatatgctgaatatatgccaatg
aaattgaaagttggcttgcgccatcctgatccagttgtggagaccagttctttgtccagt
gtaacaccacctgatgtttggtatcggctgactctacaagaggagaccattgacagtggt
tggctttctgccttgcagctggaagcaattacctatgctgctcagcaacatgaaacattc
ctccctaatggggatcgggcagccttcctgataggggacggtgccggtgtgggtaaagga
agaaccattggtggcattatttttgagaattaccttcttggtagaaaaagatctctatgg
tttagtgtatccaatgacttgaaatatgatgctgaacgggacctgagggacattggagca
aaaaatatccaggttcatgcgctgaataagttcaaatatgggaaaatctcttcaaaacaa
aatggaagcgtgaagaaaggtataatttttgcaacatactcttcgctaattggtgaaagt
caatccggtggaaaatatagaaccaggttaaagcaacttctgcactggtgtggtgaaggt
tttgatggagttatagtgtttgatgaatgccacaaagctaaaaacctgtctccagttggt
tcgtcaaaacccacaaagactggtctggctgtattggaactgcagaataaattgccaaag
gcaagagtagtgtatgctagtgctacaggtgcatcagaaccacgaaacatggcttatatg
aatcgacttggaatctggggtgaaggcacgcccttcaaggaattcggtgattttattcag
gcagtggaaaggagaggtgttggggcaatggaaattgttgctatggatatgaagctacgg
ggaatgtatatagcaagacaactgagcttttctggagtaaccttcaaaattgaagaagtt
cccttaagtcaagattacatcaagatgtataataaagcagttaaactgtgggtggaggcc
agggagaaatttcagatgtcagcagagctgattgatgcagagcagcggatgaagaagtcc
atgtggggacagttctggtcggcgcatcagaggtttttcaaatatctctgcatcgcatcg
aaagttagaagaatcgtgcaacttgcccgggaagagatcaaaaatggaaagtgtgtggtg
attggtctacaatccactggagaagcaagaacacttgaagccctggaggagggtggtggt
gaactgaatgattttgtttcaactgctaagggagtccttcagtctttagttgagaaacac
ttcccagcacctgacagaaagaaactgtacagtttgttggggatagatatgagtgtgtcc
agcaatcatgactctcccattgacagtccatcaagacagagcaaagggaaaaaaagaaaa
gctaatgaggacaaaagggaagcaaaaaagcctcgcaaaagcaaaggtcttgccgggagt
agctcttcagagactgaatctgaagtatcagaaagtgaaggcagtgatgaagaaagcttt
ctctcagtcagttctggcgatgatgactttaaccctttcagagacgaatcttccaatgaa
gaagatgatccctggttagtgaggaaggaccgcaagaaggacaaagacaagaaaaagaaa
aagaaaagtattgatccagattctatccaaagtgccttactagcatctggccttggatca
aaaaagactagtttctctacgatcacaatcagcagcacaacaaataacgcacttccttca
ggtaacagcagccatagcattgtagccagccaggatgcagtagaaagagctcagcaaatg
aaacgggagttgcttgagaagctggagcggtttgcagaggacctgcctcccaacacactg
gatgaattaatagatgagctcggtggtcctgataatgtagcagagatgacaggacggaaa
ggtagggttgtgagcaacgatgatggcagcatatcttatgaatcgagatcagaacttgat
gtccctgtagaaattctcaatatcacagagaagcagcggtttatgaatggagagaagaat
attgcaatcatttcggaagcagccagttctggaatttcattgcaagcagatcgcagagtt
aagaaccaaaggcggcgagtgcacatgaccttggagttgccctggagtgcagaccgtgcc
attcagcagtttggtagaacacatcggtcaaaccaagtgacttctcccgagtatgttttt
ctcatctcagaattggcaggagaacagagatttgcatctattgttgcaaaaagacttgaa
agtttgggtgctctcacacatggtgacaggcgagccactgaaaccagagatttgagcaga
ttcaattttgataacaagtatggaagaaatgccctggaaatagtaatgaaatccattgta
aatctggacagtccactggtgtctgcgcccaaagactatcttggggattttttcaaagat
gttcgacagggattaattggtgtgggtttgataaatgtggaagatcgttcaggactgctc
acactggataaagattataataatattgggaagtttctgaatcgaatccttggtatggag
gtacaccagcagaatgcactcttccagtatttttcagacactttaagtgctgtaattcag
aatgcgaagaagaatggaagatacgatatgggaattttagatctgggttctggggatgag
aaggtgaagaaactagaaacaaagaaattcttaactccagggtattctgtatcaggacat
gttgaaatttatactataagcgttgaaagagggatgtcctgggaagaagctacaaagatt
tgggcagaacaaatgggaaccgatgatggcttctatttgtcaatgcagataagaaataat
aaaaagacggcaattctggtcaaggaagttaattgcaagaagagactgttcatgatgttc
aggccaaatactggcaaacagctcaaactagagaactacattgacctaaagaagaaatat
aaaaaggtagcttctggggaagcagagacacattggctggaacagtacaagtcatctgca
gacacttgtacccatgcatattggcgtggaaactgcaaaaaagtaagcctgggaatggtt
tgtgaaattgggctgcggtgtcgcacctatcacgtcctctgtggctcagtccttagtgtc
tggacaaaagtggaaggagtcttggcatctgtgagtggaacaaatgtaaaaatgcagata
gtgcgattaaaaacagaagatgggcaaaggattgtaggtttgataattcctcagaactgt
gtctcgccattgatgaacattctgtcaacatcggaccagtcacaacagctggcactgcag
cagcaacagatgtggcagcagctccaccctcaaagcatgagtcacatgtgcaatacatag
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