Scyliorhinus torazame (cloudy catshark): 140429177
Help
Entry
140429177 CDS
T11303
Symbol
trappc11
Name
(RefSeq) trafficking protein particle complex subunit 11 isoform X1
KO
K20308
trafficking protein particle complex subunit 11
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stoz04131
]
140429177 (trappc11)
Membrane trafficking [BR:
stoz04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
140429177 (trappc11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun-like
Gryzun
NTS_TR130
Prefoldin
Motif
Other DBs
NCBI-GeneID:
140429177
NCBI-ProteinID:
XP_072371948
LinkDB
All DBs
Position
9:48597747..48708242
Genome browser
AA seq
1151 aa
AA seq
DB search
MATLLNSRNPAYASLICTMSSMQWDFPLELCCRPMAFVALTGLDVTYNAIHRAIWDAFCA
NRRADRVPISFKVLPGDHEYPKCRQKRTSYEWYIPKGILKTGWLNKHLNLVPALVVVFYE
LDWDEGQWKEKQSECATRVEIVRQSLQGRNTKVAVVLIQKKTPLPPGEDLIASERAAALC
NACDLSGKSLFVLPHTDHLVGYIIRLENAFYEHAQTYYYTEIRRVKSHKEFLNKTTHQLL
FVRHQFKTAFFSELKQDTQNALKNYRTAYNLVHELRAHETNMLEIKTMAGFINYKICRLC
FQHNAPLDAIAQFRKHVDLCKKKIGSAELAFEHTAWMSKQFQAFGDLFDEAIKLGLTAIQ
TQNPGFYYQQAAYYAQERKQLANQLCNHDPSTTYPSPDPLETPSGVLDFFGQRPWRQSHQ
SIEPPDPEKEKVGILALQLKERDVDHSELIIALLSNAVAQFKKYKCPRMKSHLMVQMGEE
YYYAKDYSKALKLLDYVMCDYRSERWWKLLTFILTTALKCAYLMGQIKDYITYSLELLGR
SSTLNNEQKSRIEKNLIKVLMNESPAPEPDCDSKAIKTAQKLWTDRISLAGSNIFTIEMQ
DYVPFVECKACFLAPSFHVDVPVQLHVYLRADCPHPFRFSKLCVCFNNQEYNQHCVVEET
YQTSDILEASSQGTMCLVPGKTRQYVFKFVARTEDVGKKVEITSVDLVLGSDTGRCVILN
WRGGGGDAASCQEALQATRSFKRRPKLPDNEVCWDSVTLQASTMVISRVPRILLQLRHEP
PALTNEMYCLTVTVQSQEATIARDVKLTAGLKPGQDANLTQTTHVTLDGTEMCDDSHPAL
LPDIPIGDLHPEEMVKKPLHIRCGQVGSRIFLVHVSYAVTTVVEGKEIICKCHKDETITI
ETVVPFDVTAKFVSTKFEHMDRVFADIPFLLMMDILSASPWSLTIANSRLELAHSMILVD
EMESQLAQVILQTGESASECFCLQCPPAPTNQSGVASGQYIISWKRTSAAKSIPVVNTVI
TLPHVIVEAIPLYVHADLPSFGRVRESLPVKYWLQNRTKLVQDVEIFVEPNDAFMFSGLK
QVRLRILPDTEQELLYNFYPLMAGYQQLPGLNISLSRFPAVSTQLLSRFLPTHVFVKPQG
RQADEVIIVAA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggcgactttacttaacagtaggaaccctgcttatgcgtcattaatctgtacaatgagc
tcaatgcaatgggattttccgttggagctttgttgccggcctatggcctttgtagccctc
acgggccttgatgtgacttataatgccatacatcgagctatttgggatgccttttgtgct
aacagacgggctgatcgagtccctatttcatttaaagtacttcctggagatcatgaatac
cctaaatgcagacaaaagaggacttcttatgagtggtacattccaaaaggaatccttaaa
actggctggctgaacaaacatctcaaccttgttcctgcactggtggtggtcttctatgaa
ctggactgggatgagggtcaatggaaggagaaacaatctgagtgtgccaccagagtagaa
attgtcagacaaagtttgcaaggaagaaacacaaaggttgctgttgtgctgatacagaag
aaaactcccttaccgccaggtgaggacttaattgcttcagagagagcagcagcactgtgc
aatgcctgtgacttgtcaggaaagtctttgtttgtgctcccacacactgatcatctcgta
gggtacattatcaggttagagaatgctttttatgagcatgctcagacatattattacacc
gagatccgaagagttaaatcacacaaagaattcttgaacaaaacaactcatcagctctta
tttgtgagacatcagttcaaaactgctttcttcagtgaattgaagcaggatacacaaaat
gcattaaaaaactacagaacggcttataaccttgtacatgaactgagagcccatgagacc
aacatgcttgaaatcaagaccatggctggattcatcaattataagatttgtcgtttatgc
ttccaacacaatgctccattggatgccatcgcgcagttccgtaagcatgtggatttgtgc
aaaaagaagataggaagtgcagaactggcatttgaacacacagcttggatgtctaaacaa
tttcaagcattcggagatttgtttgatgaagctattaaacttggcctcacggcaattcag
acccagaaccctggcttctattaccaacaggcagcatactacgcacaagaacgcaaacaa
ctagcgaatcaactctgcaaccacgatccctctaccacctatcctagtcctgacccgttg
gagacgccttctggagtattggacttttttgggcaaagaccttggaggcaaagtcaccaa
agtatcgaaccaccagatcctgagaaagagaaggttggcattctggcacttcagctcaaa
gaaagagatgttgaccactctgaattgatcatcgccctcctgagtaatgcagtggctcaa
ttcaagaaatacaagtgtccccgaatgaagagtcatttgatggttcaaatgggtgaagaa
tattactatgcaaaggactacagcaaagcattgaagttgctggattacgtgatgtgtgat
taccgcagtgaacgctggtggaagctgcttacctttattctgaccactgcactcaaatgc
gcttacctgatgggtcaaatcaaagattacattacctactccctggagctacttgggagg
tcttccacactgaataacgaacagaaatctcgtatagaaaagaatttgataaaagtgttg
atgaatgaaagccctgcaccagaacctgattgtgactccaaggccatcaaaactgctcag
aaattgtggacagatcgtatttctttggctggaagtaacatatttactatcgagatgcaa
gattatgtgccatttgttgaatgtaaagcctgcttcctggctcctagtttccacgttgac
gtcccagtgcaactccatgtgtacctccgagctgactgccctcatccatttagattttca
aaactctgcgtctgttttaacaaccaggagtacaaccagcactgtgtggtagaagaaacc
tatcaaacgtctgacatcttagaagcttcatcacaggggaccatgtgtttagttcctgga
aaaaccaggcagtatgtattcaagtttgttgccaggactgaagatgttggaaagaaagtg
gagattacttcggtagacctggtcctcggtagtgatactggcagatgtgtgattttgaac
tggaggggtggaggaggagatgctgcatcgtgccaggaggccttgcaggccactcgatcc
tttaagcgacgaccaaagttgcctgacaatgaagtatgttgggacagtgttacattacag
gcgagcaccatggtgatttcacgagttccaagaatattgttgcagctgcgccatgaaccc
cctgcattgaccaatgaaatgtactgcttaacagttactgttcagtcacaagaggcgacc
attgcaagagatgtgaagctcacagcagggttgaaaccaggccaggatgccaacctcacg
cagacaacacacgtcacccttgatggtaccgagatgtgtgatgattctcatcctgctttg
cttcctgatattcccattggagacttacacccagaggaaatggtgaagaaaccgctgcac
atccgatgtggacaggttggatcgagaatttttttggttcatgtttcttatgctgttact
actgttgttgaaggcaaagaaataatttgcaaatgccataaggatgagaccatcactatt
gaaacagttgtgccatttgatgttacggcaaagtttgtttctacaaaatttgaacatatg
gatcgggtgtttgcagatattccattccttttgatgatggatatcctgagtgcatctcca
tggtccctcaccatagcaaacagcagactggaacttgcacattccatgatattagtcgat
gagatggagtcacagctagcacaagtgattttacagacaggagaaagtgccagtgagtgc
ttctgcttacagtgtcctccagcacctacgaatcagagtggagttgcctcgggccaatat
ataatctcttggaaaaggacctccgctgctaaaagtatacctgttgtcaacacagtgatt
acgttgccccatgtgattgtggaggcaattccgctctatgttcatgcagatcttccatca
ttcggcagggtccgcgagtctttgccagtcaaatattggttgcagaacaggaccaaactg
gtgcaggatgtggagattttcgtggagcccaatgatgcattcatgttttctggtctgaaa
caggtccggttgcgaattctgccagacaccgaacaggagttattgtacaacttctatccg
ctcatggctgggtaccagcaactgccaggtctcaacataagcttgtcacggtttcctgcg
gtctctacccagctgctgagcagattccttcccacccacgtttttgtgaagccccagggt
cggcaggcggatgaagtaatcattgtagctgcttga
DBGET
integrated database retrieval system
