Scyliorhinus torazame (cloudy catshark): 140430591
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Entry
140430591 CDS
T11303
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35 isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
stoz Scyliorhinus torazame (cloudy catshark)
Pathway
stoz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
stoz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140430591 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
stoz04131
]
140430591 (vps35)
Membrane trafficking [BR:
stoz04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
140430591 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
140430591
NCBI-ProteinID:
XP_072374272
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All DBs
Position
10:complement(60513832..60606960)
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AA seq
796 aa
AA seq
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MPTSQQSPQDEQEKLLDEAVQTVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYIK
SFSQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEETEEVVTGDINDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDGLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQSVNVKNIII
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPERVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPIDTYNSILTVLKLKH
FHPLFEYFDYESRKNMSCYILSNALEFNTEIIGQEQVDAILNLVSTLIQDQPDQPAEDPD
QEDFAEEQSLVGRFIHLFQSEDPDQQYMILNTARKHFGAGGNQRIRFTLPPLVFSAYQLA
FCYKENSKVDEKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGDIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQCRAVSICAHLFWSGRNTDKNGEEIHDGKRVMECLKKALKIANQCMDPSLQVQLF
TEILNRYIYFYEKENEAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
RESPEADGPIYEGLVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacttctcaacagtcacctcaggatgagcaggaaaagcttcttgatgaagctgtt
cagactgttaaggtccagtcgttccagatgaagcgatgcttggacaagaataaattgatg
gatgcactaaaacatgcttcgaatatgcttggtgagctgcggacttccatgctatcaccg
aagagttactatgagctctacatggccatttcagatgaattacattatttggaagtttac
ctgactgatgagtttgccaaagggcgaaaggtggctgacctgtatgagcttgttcagtat
gctggcaatattattccaagactctacttgcttatcactgttggagttgtctacatcaag
tcattttctcagtccaggaaggatattcttaaagatctggtggaaatgtgtcgaggggtg
cagcatccattgcgagggctcttcctcaggaactatctgcttcaatgtacaagaaatatt
ttgccagatgaaggggaggagactgaagaagttgtaactggagacatcaatgattccatg
gactttgtgctcctgaactttgcagaaatgaacaaactctgggtacgaatgcaacaccag
ggtcacagcagagaccgtgaaaagcgggaacgtgaacgtcaggaactgcgaatcctcgtt
ggtacaaacttagttcgactaagtcagttagaaggggttaatgtagaacggtacaagcag
attgtattaactggaatattggaacaggttgtaaactgcagggatggcttggctcaagag
tatctcatggaatgtattattcaggtattccctgatgagtttcatctgcagacgctgaat
ccattccttcgttcttgtgcagagctccatcaaagtgttaatgtcaaaaacattatcatt
gctttgattgatcggttggctttgtttgcgcatcgtgaagatggtcccggaatccctgct
gatataaaactgtttgacatcttttcccaacaagtagcaacggttatacagtcaagacaa
gatatgccttctgaagatgttgtatctttacaagtgtctcttatcaacttggccatgaag
tgttaccctgaacgggtggactatgttgataaagttcttgaaacaactgtggagatcttt
aacaaactcaatcttgaacatattgctactagcagtgcagtttctaaagaattaacacgg
cttctaaagattcccatcgacacgtacaacagcatcctgactgtattgaagttgaaacac
ttccatcctttgtttgaatactttgactatgagtcacgcaaaaatatgagctgttacata
ctaagcaatgcgcttgagttcaacacagagataattggacaagaacaggtggatgctata
ctgaacctggtgtcgacgttgattcaggatcagccagatcaaccagcagaagatcctgat
caagaagattttgctgaagagcaaagtcttgttggtagatttattcatttatttcagtct
gaagatcctgaccaacagtatatgattttaaatactgccaggaaacactttggtgctggt
ggaaatcaaaggattcgtttcactttaccaccacttgtattttctgcttaccagctggcc
ttctgctacaaagagaattcaaaagtggatgaaaaatgggaaaagaagtgccagaagata
ttttcttttgcccaccagacgatcagtgccctgattaaagcagagcttgcagagttacca
cttcgtctatttctccagggagcacttgcagctggggatattggatttgagaatcatgaa
accgtggcttatgagtttatgtcacaggcattctctttgtatgaagatgaaatcagtgat
tcgaaggcacagctggcagcaatcactttgataattggaacatttgagcggatgaaatgt
ttcagtgaagagaaccatgagcctttgaggacacaatgtgcattggctgcttcaaagtta
cttaaaaagccagatcagtgccgtgctgttagcatctgtgctcatttattttggtctggg
cggaacacagataagaatggagaggaaattcatgatggcaagagagtgatggaatgcctt
aagaaggcgttgaagatagccaatcagtgtatggatccatcactacaagtacagctcttc
actgaaatccttaatcgatatatatacttttatgagaaagaaaatgaggcggtgactatt
caagtcttaaatcagcttattcaaaaaataagagaagatctcccaaacttagaatccagc
gaagaaactgagcaaattaacaaacactttcacaacacactggagcatctgcgtctgcgg
agagaatcgcctgaagctgatggacctatttatgaaggtcttgtcttgtaa
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