Salinispora tropica: Strop_0213
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Entry
Strop_0213 CDS
T00504
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
stp
Salinispora tropica
Pathway
stp03030
DNA replication
stp03430
Mismatch repair
stp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Strop_0213
03430 Mismatch repair
Strop_0213
03440 Homologous recombination
Strop_0213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stp03032
]
Strop_0213
03400 DNA repair and recombination proteins [BR:
stp03400
]
Strop_0213
Enzymes [BR:
stp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Strop_0213
DNA replication proteins [BR:
stp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Strop_0213
DNA repair and recombination proteins [BR:
stp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Strop_0213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DnaX_C
AAA_22
RuvB_N
AAA_16
AAA_30
Rad17
AAA_14
AAA_5
Mg_chelatase
DciA
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ABP52698
UniProt:
A4X1E8
LinkDB
All DBs
Position
242420..244846
Genome browser
AA seq
808 aa
AA seq
DB search
MALALYRKYRPRTFAEVIGQEHVTEPLSQALRGGRLNHAYLFSGPRGCGKTSSARILARS
LNCEHGPTPEPCGTCASCRALATDGAGSIDVIEIDAASHGGVDDARELREKAFFAPAQSR
FKIYVIDEAHMVSSAGFNALLKLVEEPPEYVKFIFATTEPEKVLGTIKSRTHHYPFRLIP
PKVLRPYLEQLCQAEGVQVEPAVFPLVVRAGGGSARDSLSVLDQLIAGAGPEGVIYARAA
ALLGVTDSALIDEMCDALAAGDGAAAYATVDRIVGAGHDPRRFAADLLERLRDLIILQRV
PDAAPKGLVDGPDDQIERMTAQAQRLGPGTLSRCADIVHDGLVEMRGATAPRLLLELICA
RLLLPRIDDSTGGLLQRLETLERRHTHAGADVPPAVPTPATGSSPAAAVPPAVPTPATGS
SPAPAVPTPAAGAPPAPAVGSPPRPVGTAVSASMDGPAVSDGPRRASPRPAVMPDPATPE
PPRPGTTGQGPLDAAAVRRRWPEVVGLVGRKSKKAAAWAREATVHEVDGQTLVLAFRYPF
HAQALANEPDLLIESLHEELGERWQIRCEVAGERVGGPAAGPRAAGPARPATAPARPDPA
VAPAAPPRSSAGDGAVDGMAPRSAGSADEQEWPEPARPGGAAPPEPAAGTAEEWPATARP
GGAGVDATAAAAAGPGGSTTGGGRASGAGVAPAASAVSRPPVTSGARASSAIAAARAAAA
GGAQRSAASPRRTAEPDWAGEPPYDPDYDGVPRGGAAPAVVHEGFDPGDEPLDEVIDERT
ARQSSEEQAVRLLREAFGAERIDEVKSR
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctggcgctctaccgcaagtaccggccacgtaccttcgccgaggttatcgggcag
gaacacgtcaccgagccgttgtcgcaggcgctgcggggcgggcggctcaatcacgcgtac
ctcttctctgggccgcgtggctgcggcaaaacatccagtgcccgcatcctggcccggtcg
ctcaactgcgagcacggcccgaccccggagccctgtgggacctgtgcctcctgtcgggcg
ctggctaccgatggcgccggttcgatcgacgtcatcgagatcgacgcggccagtcacggc
ggtgttgacgacgcgcgggagctgcgcgagaaggcgttcttcgcgccggcgcagagccgc
ttcaagatttacgtcatcgacgaggcgcacatggtctcgtcggccggcttcaacgccctg
ctcaagctggtcgaggagcccccggagtacgtcaagttcatcttcgccaccaccgagccg
gagaaggtcctcggcacgatcaagtcgcggacccaccactacccgttccggctgatcccg
ccgaaggtgctccggccctacctggaacagctctgccaggccgagggtgtccaggtcgag
ccggcggtctttcccctcgtcgtgcgggccggtggtggcagcgcccgggacagtctttcg
gtgctcgaccagctcatcgccggggcaggtccggagggcgtcatctacgcccgggccgcc
gcgctgctcggggtcaccgactcggcgctgatcgacgagatgtgcgacgcgctcgccgca
ggggacggtgcggcggcgtacgccaccgtcgaccggatcgtcggcgctggccacgatccg
cgccggttcgccgctgacctgctggagcggctgcgtgatctgatcatcctccagcgggtg
ccggacgccgcgccgaagggcttggtggacggcccggacgaccagatcgagcggatgacc
gcccaggcgcagcggcttgggccgggcaccctgtcgcggtgcgccgacatcgtgcacgac
ggtctggtcgagatgcgaggtgccaccgcgccccggctactgctggaactgatctgcgcc
cggctgctgctgcctcggattgacgactcgaccggtggccttctccaacgcctcgaaact
ctggagcgtcggcacacccacgccggcgccgacgtcccgccagctgttcccacgccggct
accggctcgtcccccgcggcggccgtcccgccagctgtccccacgccggcgaccggctcg
tcccccgcgccagctgtccccacgccggctgctggtgcgccgcccgcgccggccgtcggc
tcgccgccccgtccggtgggtaccgcggtgtctgcgagcatggatggtccggccgtgtcc
gacggtccccgccgtgcctcccctcggccggcggtcatgcccgacccggccacccccgag
ccgccccgcccgggtacgaccggtcagggtccgctcgacgcggccgcggtacgtcggcgc
tggccggaggtggtcggtctggtgggccgcaagagcaagaaggccgctgcctgggcgcgt
gaggcgacggttcacgaggtcgacggtcagaccctcgtgttggccttccgctatccgttt
catgcccaggccctcgccaacgaaccggatttgctgatcgagtccctccatgaggaactg
ggtgagcgctggcagatcaggtgcgaggtagctggtgagcgggtcggcggacccgccgct
gggccccgcgcagccggcccggcccggcccgcgaccgcgccggcacggccggacccggcg
gtggctcccgccgctccgccgcgatcgtcggccggtgatggggcggtcgatggcatggcc
ccgcgctccgctgggtccgccgatgagcaggagtggccggagccggcacgccccggcggg
gctgccccgcccgagccggcggctggcacagccgaggagtggcccgcgacggcccgcccg
ggtggggcgggagtggacgccacggcggcagcagcagcggggccgggcggctcgaccacc
ggtggtggccgggcctccggcgcgggtgtggcgcctgccgcttcggccgtatcccggccg
ccagtgacgagcggtgcgcgggcgagcagcgcgattgccgctgcccgggcggcggctgcc
ggtggcgcgcagcgttccgctgcctcgccgcggcggacggcggagccggattgggcaggt
gagccgccgtacgatccggactacgacggcgtgccgcgtggtggtgccgcccccgcagtg
gtgcatgaggggttcgatccgggggacgagccgctggacgaggtgattgatgagcggacc
gcccgtcagtccagtgaggagcaggcggtgcggctgctccgtgaggcgttcggtgcggag
cggatcgacgaggtcaagtcccgttag
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