Salinispora tropica: Strop_0681
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Entry
Strop_0681 CDS
T00504
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
stp
Salinispora tropica
Pathway
stp00300
Lysine biosynthesis
stp00470
D-Amino acid metabolism
stp01100
Metabolic pathways
stp01110
Biosynthesis of secondary metabolites
stp01120
Microbial metabolism in diverse environments
stp01230
Biosynthesis of amino acids
Module
stp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Strop_0681
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Strop_0681
Enzymes [BR:
stp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Strop_0681
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
EccE
Motif
Other DBs
NCBI-ProteinID:
ABP53158
UniProt:
A4X2Q8
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All DBs
Position
766740..767990
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AA seq
416 aa
AA seq
DB search
MSELAELFNRPDAPQTPAYFYDLDELTRSNAALRAALPRPTELFYSLKANPHPTVVAELT
AAGCRAEVCSPGELRVALAAGCDPAQVLYTGPGKRDIDLAEAVRAGVELFSVDSPYGLDQ
LDRMAREHDVEVRALVRINDDTPAPGQGLTMTGVASQFGADVRWVLDQPDLFGPRRNVCP
VGFHLYMGSNVDGEDALIAQFTQSVDTIRRLVAATGRQPELIDLGGGFGAPFARAGARPD
LPKLADRLAALLADAFPGWPEQGPAVAFESGRYLVGTCGTLVTRVLEVKRSQGIPVVVLE
SGIHHLGGMSGLRRLPPIVPDLLTVDAAAGPPIPGTIVTGPLCTPLDTWARATALPPLVP
GQLVAVPNVGAYGLYASLVAFLAHPMPIEVTIAGGQVTSVTRLELTRHTVTGSDRG
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgagctagcggaactgttcaaccggccggacgcgccacagaccccggcgtacttc
tacgacctagacgagctgacccgctccaacgcggcgctgcgcgccgccctgccgaggccc
accgagctgttctactcgctcaaggccaacccgcacccaaccgtggtcgccgagctgact
gccgcggggtgccgggcagaggtctgctcccctggcgagctgcgcgtcgcactggcggcc
ggctgcgatccggcccaggtcctctacaccggcccgggcaagcgagacatcgacctggcc
gaggccgtccgggccggggtcgagctattctccgtcgactcgccgtacgggctggaccag
ctcgaccggatggcccgcgagcacgacgtcgaggtacgcgccctggtgcggatcaacgac
gacactccggcgcctggtcaggggctcaccatgaccggcgtcgcctcacaattcggcgcg
gacgtgcgttgggtgctggaccagcccgacctattcggaccgcgccgcaacgtgtgcccg
gtcgggttccacctctacatgggaagcaacgtcgacggtgaggacgctctcatcgctcag
ttcacgcaatccgtcgacaccatacgccggctggtggcggcgaccggaaggcaaccggag
ctgatcgacctaggtggcggcttcggggcgcctttcgcgcgggccggcgctcggccggat
ttgccgaagctggcagaccggctggcggcgttgctcgccgacgccttcccaggctggccg
gagcaaggaccggcggtggccttcgagtcaggccggtacctggtcggcacctgcggcacc
ctggtcacccgggtcctggaagtgaagcggtcgcagggcatccccgtggtcgtcctcgag
tcgggcatccaccacctcggtgggatgtccggtctgcggcggctaccgccgatcgtgccg
gacctgctaacggtggacgcagcggccggaccgccaatacccggaaccatcgtcaccggg
ccgctgtgcacaccgctggacacgtgggcccgcgccaccgccctcccgccactagtccca
ggccagctggtcgccgtgccaaacgtgggcgcgtacggcctctacgccagcctggtggcc
ttcctcgcgcatcccatgcccatcgaggtcaccatcgccgggggtcaggtcaccagcgtg
acccggctggaactcacccggcacaccgtcaccggtagcgacaggggttga
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