Salinispora tropica: Strop_0843
Help
Entry
Strop_0843 CDS
T00504
Name
(GenBank) ABC transporter related
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
stp
Salinispora tropica
Pathway
stp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Strop_0843
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
stp02000
]
Strop_0843
Transporters [BR:
stp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Strop_0843
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_16
DUF87
RsgA_GTPase
AAA_23
AAA_18
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ABP53320
UniProt:
A4X370
LinkDB
All DBs
Position
complement(943565..945298)
Genome browser
AA seq
577 aa
AA seq
DB search
MLIQLLRTYLRPYHRPLAAVVVLQFVGTIASLYLPSLNADIIDLGVARGDTGFIVRTGAW
MLVVSLVQIVCSIAAVYLGARTAMAYGRDVRAALFAHVNSFSAREVAHFGAPSLITRNTN
DVQQVQMLVLMSCTMLVAAPIMSVGGVVMALREDLGLSWLLLVSVPVLALGLGQVIRRMV
PGFRLMQTRIDAVNRVLREQISGIRVVRAFVREPYETRRFAAANTDLTATALHTGRLAAL
VFPIVMLVLNVSSVAVLWFGAGRVDAGAIEVGSLTAFLQYLMQILMAVMMATFMLMMVPR
AAVCAERIGEVLATETSVTPPPEPVTAPPGRAEVELRTVRFQYPGAAEPVLRDVSFRVTP
GTTTAIIGSTGAGKSTLLALISRLIDVTSGAVLVDGVNVRELAPEALWQRIGLVPQRPYL
FTGTIASNLRHGNPDATEAELWAALEVAQARDFVAAMPDGLDAPVAQGGTNLSGGQRQRL
AIARALVRRPEIYLFDDSFSALDLGTDARLRAALRPVTADAAVVVVAQRVATVADADRIV
VLENGGVVGIGQHAELLTTCPTYAEIVASQQSTGVTA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
ttgctgatccaactgctccgcacctacctacgcccttaccaccgcccgctggcggccgtg
gtcgtcctccagttcgtcggcaccatcgcctcgctctacctgccgagcctcaacgccgac
atcatcgaccttggggtggcccgcggcgacaccggcttcatcgtgcgcaccggggcctgg
atgctcgtcgtcagcctggtgcagatcgtctgctcgatcgccgccgtctacctgggcgcc
cgcaccgcgatggcgtacggccgggatgtccgcgcggcgctcttcgcccacgtcaacagc
ttctccgcgcgggaggtcgcccacttcggcgcaccatcactgatcactcgcaacaccaac
gacgtgcagcaggtgcagatgctggtgctgatgagctgcacgatgctggtcgccgcgccg
atcatgagcgtcggcggggtggtgatggcgctccgcgaagacctcgggctctcctggctg
ctgctggtcagcgtcccagtcctggccctcggcctgggccaggtgatccggcggatggtg
cccggattccgactcatgcagacccgcatcgacgcggttaaccgggttctccgcgagcag
atcagtggcatccgcgtggtccgggcgttcgttcgggaaccgtacgagacccgccgcttc
gccgccgccaacaccgacctgaccgcgaccgccctacacaccggccgactggcagcactg
gtcttcccgatcgtgatgctggtcctcaacgtctccagcgtcgcggtgctctggttcggg
gccggacgggtggacgccggcgccatcgaggtcggctccctcaccgccttcctccagtac
ctgatgcagatcctgatggcggtcatgatggccacgttcatgctgatgatggtgccgagg
gcggcggtttgcgccgagcgcatcggcgaggtgctggcgaccgagacctcggtcacgccc
ccaccggagccggtcaccgcaccgcccggccgagctgaggtggagctgcgcacggtgcgg
ttccagtacccgggcgcggccgaaccggtgctgcgggacgtgtcgttccgggtgaccccg
ggcacgaccaccgcgatcatcggcagcaccggcgccggcaagagcaccctgctcgccctg
atctcacggttgatcgacgttacctccggtgcggtgctggtggacggggtcaatgtccgg
gagctcgcaccggaggcgctgtggcagcgaatcgggctggtgccacagcgcccgtacctg
ttcaccggcacgatcgccagcaacctgcgacacggcaacccggacgcgaccgaggccgag
ctgtgggcggcgctggaggtggcacaggcacgcgacttcgtcgcggcgatgccggacggg
ctggacgcacccgtagcgcagggtggcaccaacctctccggcgggcagcggcagcggctg
gccatcgcccgggcgctggtgcgccgaccagagatttacctcttcgacgactccttctcc
gcccttgacctcggtaccgacgcgcggctgcgggcggcactgcgcccagtcaccgccgac
gcggcggtggtggtcgtggcgcagcgggtcgccaccgtggcagacgccgaccggatcgtg
gtgctggagaacgggggcgtcgtggggatcggccagcacgccgagctactgacgacctgc
cccacgtacgcggagatcgtcgcatcacagcagagcacgggggtgacggcatga
DBGET
integrated database retrieval system
