Salinispora tropica: Strop_1260
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Entry
Strop_1260 CDS
T00504
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
stp
Salinispora tropica
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stp03032
]
Strop_1260
03036 Chromosome and associated proteins [BR:
stp03036
]
Strop_1260
03400 DNA repair and recombination proteins [BR:
stp03400
]
Strop_1260
DNA replication proteins [BR:
stp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Strop_1260
Chromosome and associated proteins [BR:
stp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Strop_1260
DNA repair and recombination proteins [BR:
stp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Strop_1260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ABP53730
UniProt:
A4X4D0
LinkDB
All DBs
Position
1422379..1423092
Genome browser
AA seq
237 aa
AA seq
DB search
MRAEWLASSQLHNREEVVNKAELIETLAVRLGDRKTASAALDAVLTEVQAAVTKGEKVSI
TGFGAFEKRVRGARTARNPRTGEAVKVKKTSVPTFRPGTGFKEMVASGKAPKATAAKKTT
AAKAAGAKTTGTAAKKTTAAKATKTTAAKKTTAAKKTTAAKKTTAAKAAAPKKTAAKKTT
AAKVAPAKRATAPKATAARKSATKKAAPAAKSTTARKSAAATKATARKAPAKRATTR
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgcagaatggctcgcgtcgagtcagttgcacaatcgggaggaagtcgtgaacaag
gccgagcttatcgagacgctcgccgttcgcctgggggaccggaagacggcgtcggccgcg
ctcgacgcggtcctaaccgaggtccaggcggcggtcaccaagggtgagaaggtgtcgatc
accggcttcggagcgttcgagaagcgtgtccggggagcccgaacagcgcgcaatccacgg
accggcgaggcggtgaaggtcaagaagacctccgtcccgacgttccgcccgggcaccggg
ttcaaggagatggtggccagcggcaaggcgccgaaggccacggcggcgaagaagaccacc
gccgccaaggcggccggggccaagaccactggcaccgcggccaagaagaccaccgcggcg
aaggcgacgaagaccaccgccgccaagaagacaaccgctgccaagaagacaaccgctgcc
aagaagaccacggctgccaaggccgccgcgccgaagaagaccgcggcgaagaagaccacc
gcggccaaggttgctccggcgaagcgcgccaccgcgccgaaggccaccgcggcgcggaag
tccgcgacgaagaaggcggcgccggccgcgaagtccacgacggcccggaagagcgcagcg
gccacgaaggccaccgcgcggaaggcgccggcgaagcgggcgaccacgcgctga
DBGET
integrated database retrieval system
