Salinispora tropica: Strop_1361
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Entry
Strop_1361 CDS
T00504
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
stp
Salinispora tropica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_3
PAS_4
PAS
PAS_8
PAS_11
Motif
Other DBs
NCBI-ProteinID:
ABP53828
UniProt:
A4X4M8
LinkDB
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Position
1530293..1532488
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AA seq
731 aa
AA seq
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MAVVLESGGRDRSQAGAQGYAAEWARAVRRLGFVPLSAEETQRLLHRHTVRLAQALRAEP
FSSHPAAQVGRALAEAHLTEPGVLDWSVRALGDRFLARVLPDLVGTGEVATRVAALQGAM
AAGFARALRDRTFAQQERIARSAWQARDEVEQALRDSEARFRAVFSGAAIGIGIGLVDGQ
IIDVNQVFADMLGYTIEELRQRNVSSLFHPDDAAGMWELYQQLVDGKRDSVRVEKRYYRK
DGSAVWTDLAVSLVRHDDGHPRFTVAVVEDITDRYELQQRLRFQALHDPLTGLPNRTLFF
ETLGVVFDNAGAGRPVGVCFLDLDGFKAVNDSLGHDLGDQLLVEIADRLSDCVAGSGHLV
ARMGGDEFVILVDDGESLDDVVSVAEAALAAVAAPIRIGDHQLMVSASVGIVECPVNTTD
PSELMKAADTTLYWAKAEGRGRWAVWDRERSAREIARSTLAAGLPTALERDEFVLDYQPI
VSLLDGSMRAVEALVRWQHPKLGLLGPAQFIGLAEETGLIVQLGEWVLRQACRDADAWRR
EFPEARLVVSVNLAARQVEHPAIVDMVAGALTDSGLPAELLQLELTESAVMGTAGEPLRA
LHRLAGLGVGLAIDDFGTGYSNLAYLRRLPIRCLKLAGPFVEGLREGVTETATSHRDEQI
VDALVRLARALGLLVTAEAVETGVQAERLRVLRCDTGQGYWFGAPGPAGEITARLRGAAA
RNPSGTADHRT
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtggccgttgtcctggagtcgggagggcgcgaccgcagccaggccggcgcccaggggtac
gcggccgagtgggcccgcgccgtacgccggctcggcttcgtcccgttgagcgccgaggag
acccagcggctgttgcaccggcacaccgttcggctggcccaggcgctgcgcgccgagccg
ttctcgtcccaccccgcggcccaggtcggccgggcgctggccgaggcgcacctgaccgag
ccgggggtgctcgactggtcggtacgggcactcggtgaccgcttcctcgcccgggtgctg
cccgacctggtcggtacaggtgaggtggctacccgcgtcgcggcgttgcagggcgcgatg
gcagccggattcgcccgggcgctgcgggaccgtaccttcgcccagcaggagcggatcgcc
cgctcggcctggcaggcgcgggacgaggtggagcaggcgttgcgggacagcgaggcccgg
ttccgcgcggtcttctcgggtgccgccatcgggatcggcatcgggttggtggatggtcag
atcatcgacgtcaaccaggtgttcgccgacatgctcggctacacgatcgaggagctgcgg
cagcggaatgtgtcgtcgctgttccacccggacgacgcggccggtatgtgggagctctac
cagcaactcgtcgatggcaagcgggactccgtccgggtcgagaagcggtactaccgcaag
gacggttctgccgtctggaccgacctggcggtgtcgttggtccggcacgacgacggtcat
ccccggttcaccgtcgcggtggtggaggacatcaccgatcggtacgagctccagcagcgc
ctccggtttcaggcactgcacgacccactcaccggcctgcccaaccggaccctcttcttc
gagaccctcggagtggtctttgacaatgctggcgctggccgcccggtcggggtctgcttc
ctggatctggacgggttcaaggcggtcaacgacagcctcggtcacgacctgggcgaccag
ctgctcgtggagatcgccgaccggctgtcggactgcgtcgccgggtccgggcacctggtg
gcacggatggggggcgacgagttcgtcatcctggttgacgacggggagtccctcgacgac
gtggtgagcgtcgcggaggccgcgctcgcggccgtcgccgcaccgattcggatcggtgat
caccagctcatggtctcggcgagcgtcggcatcgtcgagtgcccggtgaacacgaccgac
ccgtcggagctgatgaaggcggccgacaccacgctgtactgggccaaggccgaggggcgc
ggccggtgggcggtctgggatcgggagcgaagcgcgcgtgagatcgcccggtccacgctg
gccgccgggctgccgacggcgttggagcgggatgagttcgtgctggactaccagccgatc
gtctccctgctggacggctcgatgcgggccgtggaggccctcgtccggtggcagcatccc
aagctgggcttgctcggcccggctcagttcatcgggctggccgaggagaccgggctgatc
gtccaactcggcgagtgggtgctgcgccaggcgtgccgggacgccgatgcctggcggcgc
gagtttccggaggctcgcctggtcgtcagcgtgaacctcgccgcgcgtcaggtggagcat
cccgccatcgtggacatggtggcgggggcgctgaccgacagtgggcttcccgccgagctc
ctgcagctggagctgaccgagagcgctgtgatgggcaccgcgggggaaccgctgcgggcg
ttgcatcggctcgccgggctgggggtggggctggcaatcgacgacttcggcaccggctac
tcgaatctggcgtacctgcgccggttgccgatccggtgcctgaagttggcgggtccgttc
gtggaggggctgcgcgagggcgtaacagagacggcgaccagccatcgggacgagcagatc
gtggacgccctggtgcggctggcgcgggcgcttggtctgttggtcaccgccgaggcggtg
gagaccggggtgcaggccgagcggctgcgggtgctgcggtgtgacaccgggcagggctac
tggttcggtgcgccggggccggcaggtgagatcacggcccggctgaggggagcggcggcg
cggaacccgtcgggtacggcggatcaccgtacgtga
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