KEGG   Salinispora tropica: Strop_1406
Entry
Strop_1406        CDS       T00504                                 
Name
(GenBank) ATP dependent helicase, Lhr family
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
stp  Salinispora tropica
Brite
KEGG Orthology (KO) [BR:stp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stp03400]
    Strop_1406
Enzymes [BR:stp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Strop_1406
    5.6.2.6  RNA 3'-5' helicase
     Strop_1406
DNA repair and recombination proteins [BR:stp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Strop_1406
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr WHD_4th_Lhr WHD_2nd_Lhr DEAD WHD_3rd_Lhr Helicase_C ResIII AAA_25 DUF6406 AAA_22
Other DBs
NCBI-ProteinID: ABP53873
UniProt: A4X4S3
LinkDB
Position
complement(1578815..1583434)
AA seq 1539 aa
MANQAGGRSTSGEASDTTAVPHTTDNTALEAFGPATREWFAAAFAAPTTAQAGAWRSIGA
GRNALVVAPTGSGKTLAAFLWSLDRLAREPAPPEPRQRCRVLYVSPLKALAVDVERNLRT
PLAGIRQAAARLGLTPPAITVGMRTGDTPADERRAFARTPPDVLITTPESLFLLLTSAAR
DSLRGVQTVIVDEVHAVAGTKRGAHLALSLERLDQLLPTAAQRIGLSATVRPVDACARFL
GGARPVDVVAPPTVKTIDVGVQVPVADMTLLDEPEQPGPDLDRPRRASIWPAVEERVYAL
VRAHRSTIVFTNSRRSAERLCARLNELAAEESAGDAPGAATQPPAQPPAQLMAQAGAGTG
APPVIARAHHGSVSRTEREHIEESLKSGQLPAVVATSSLELGIDMGAVDLVVQIEAPPSV
AAGLQRVGRAGHQVGAVSRGVVFPKHRGDLLACAVVAERMTEGAIEELHHPRNPLDVLAQ
HIVAMVSLEPWQVSDLADLVRRSAPFAELPDSALHAVLDMLSGRYPSTAFAELRPRLVWD
RATDLLTGRPGAQRLAVTSGGTIPDRGLFGVFLAGAERAARVGELDEEMVYESRVGDVFL
LGSSSWRIEDITPDRVLVTPAPGQAAKMPFWKGDQPGRPVELGRAIGARLRTLVQSDDAA
ATAALRTGGLDEWAAGNLLAYLREQQAATRTLPDDRTVVVERFRDELGDWRLAVHSVLGA
QVNAAWALAIGRRLTERYGVDAQVLPADDGIVVRLPDTAAEPPGAEAVVFEPDEITQLVE
ESVGTSALFAARFRECAARSLLLPRRDPRRRQPLWQQRQRAAQLLDVAREYADFPVTLEA
ARECLQDVFDQPALAALMRDLAARTVRLVEVETAQPSPFARSLLFGYVGTFLYEGDAPLA
ERRAAALTLDSALLGELLGRVDLRELLDPTVLAETERHLRWRTEQRRPRDAEDVVELLRV
VGDLSTAELAERGAPAQWLTELVTARRVLRVRIAGEERWVGIEDAARLRDALGVALPGGV
AEAYLAPVADPLGDLIARYARTHGPFAAATCAARFGLGVAVVEGTLRRLATAGRVLAGEF
APDTVGIQWCDAEVLRMLRRRSLAALRREIEPVPPRALATFLPRWQQVGAAARGLPAVAA
ALEQVQGLALPGSALERLVLPARVGDYSPAQLDELCTSGEVVWAGSGAISGGDGWVVLAY
ADTAPLLLPPPDAALARTPLHDAVLDALEGGQALFFRALSDRLGSTDDAALAAVIWDLVW
AGHLTNDTLAPLRALLAGRGAHRSRPAAPRTRYRRPGRVALPSRSGPPTVAGRWSRLPER
DADPTRRAAALADVLLERHGVVTRGAVAAEQVPGGYAAVYPVLSALEERGATRRGYFVEG
LGAAQFAVPGAVDRLRALADPADGGRVRAGLALVLAATDPANPYGAALPWPERVVDSGDG
GANPTGHRAGRKAGALVVLVSGDLVLYVERGGRTLLSFTDDRDLLATAGKALADAVQGGA
LGTISVERADGEAVRSSPLRDALTAAGFRATPRGLRLRG
NT seq 4620 nt   +upstreamnt  +downstreamnt
gtggcgaaccaggcgggtggcaggtcgacgagcggcgaggccagcgacacgaccgcagtg
ccccacacgaccgacaacacagcgctcgaggcgttcggcccggccactcgggaatggttc
gccgcggcgttcgccgcaccgaccacagcccaggcgggggcctggcgctccatcggcgcc
ggccgtaacgcactggtcgtggcccccaccggctccggcaagaccctggccgcgttcctc
tggtcgctggaccggctggcccgcgagcccgccccgcccgagccccggcagcgttgccgg
gtgctctacgtcagccccctcaaggcgctcgcggtcgatgtcgaacgcaacctacgtacc
ccgctcgccggcatccgacaggccgccgcccggctgggtctgaccccgcccgcgatcacc
gtcggcatgcgtaccggcgacacccccgccgacgagcgccgcgccttcgcccgtaccccg
ccggatgtcctcatcaccaccccggagtcgctgttcctcctccttacctccgccgcccgc
gactcgctccgaggcgtacagacggtcatcgtcgacgaggtccacgcggtggccggcacc
aagcgtggagcccacctcgcgctgtcgctggaacggctcgaccagctactgcccaccgcg
gcccagcgcatcggcctctccgccaccgtccggccggttgacgcctgcgcccgtttcctc
ggcggagcccgaccagtcgacgtggtcgccccgcccaccgtcaagaccatcgacgtcggc
gtccaggtcccggtagccgacatgaccctcctcgacgagccggagcagcccgggcccgac
ctcgatcgcccccgccgcgcgtcgatctggccggcggtggaggagcgggtctacgccctc
gtccgggcacaccgttcgaccatcgtcttcaccaactcccgccgctccgccgaacgactc
tgcgcccggctcaacgagttggccgccgaggaatcggccggcgacgcgccgggggccgcc
acccaaccgccggcccaaccgccggcccagctgatggcgcaggccggggcggggaccgga
gcaccgccggtgatcgcccgcgcccaccatggcagtgtttcccgaaccgaacgcgaacac
atcgaggagtcactcaagtccgggcagctcccggcggtggtcgccacctccagcctggag
ctgggcatcgacatgggcgccgtcgatctggtcgtgcagatcgaggccccgccgagcgtg
gccgccgggctccagcgggtcggccgcgccgggcaccaggtcggcgccgtctcccggggc
gtggtgttccccaagcaccgaggagacctgctcgcctgcgcagtggtagccgaacggatg
accgagggcgcgatcgaggagctgcaccacccacgcaaccccctcgacgtgctggcccag
cacatcgtggcgatggtgtcactcgagccgtggcaggtcagcgacctggccgacctggtc
cgccgttccgcgcccttcgcggagctccccgactcggcgctgcacgcggtactcgacatg
ctctccggccgctacccgtcgaccgccttcgccgagctgcggccccgcctggtctgggac
cgcgccaccgacctgctgaccggccgtcccggcgcccagcggctcgcggtgaccagcggc
ggcaccatccccgaccggggcctgttcggcgtcttcctggccggggcggagcgggccgca
agagtcggcgagctggacgaggagatggtctacgagtcgcgggttggcgatgtcttcctc
ctcggctcatcgtcctggcgcatcgaggacatcaccccggaccgggtgctggtaaccccc
gcccccggccaggcggccaaaatgcccttctggaagggcgaccagccgggccgcccggtg
gagctgggccgggccatcggtgcccgcctccgcaccctggtgcagtccgacgacgccgcc
gccacagccgcgttgcgcaccggggggctcgacgaatgggcagccggaaacctgctggcg
tacctgcgggagcagcaggcggccacccgtaccctgccggacgaccggaccgtggtggtc
gagcgtttccgcgacgagctgggtgactggcggctcgccgtacacagtgtcctcggcgcc
caggtcaacgccgcgtgggcgctggccatcggccgccggctcaccgagcggtacggggtg
gacgcccaggtgctgcccgccgatgacgggattgtcgtccgcctgcccgacaccgcggcg
gagccgcccggggcagaagcggtcgtcttcgagcccgacgagatcacccagctggtcgag
gagtcggtgggtacgtcagcgctgttcgccgcccggttccgcgagtgcgccgcccggtcg
ctgctcctgccccgccgcgatccgcgccgccgccagccgctctggcagcaacggcagcgc
gccgcccagctcctcgacgtcgcccgggagtacgcggactttccggtcaccctggaagcg
gctcgggaatgcctccaggacgtcttcgaccagccggcactcgccgcgctgatgcgcgac
ctggccgcccgcaccgtacgcctggtcgaggtggagacggcgcagccgtcgccgttcgcg
cggtcgctgctcttcggctacgtcgggacgttcctctacgagggtgacgctcccctcgcc
gagcggcgtgccgccgcgctcaccctggattcggccctgctcggcgagctactcggccgg
gtcgacctgcgggagctactcgacccgacggtgctcgccgaaaccgaacgccacctgcgc
tggcgcaccgaacagcgccgcccccgcgacgccgaggacgtggtcgagctgctgcgggtg
gtcggcgacctcagcaccgctgagctggccgagcgcggcgctccggcgcagtggctgacc
gagctggtgaccgcccgccgggtgctgcgggtccgcatcgccggcgaggagcgctgggtg
ggaatcgaggacgccgcccggctgcgggacgcgctgggggtggcgctgcccggcggcgtg
gccgaggcgtacctggccccggtggccgacccgctcggtgacctcatcgcccgctatgcc
cgcacgcacgggccgttcgccgccgccacctgcgccgcccggttcgggctcggggtggcg
gtggtcgaggggacgctgcgccggctcgccaccgccggtcgggtgctcgccggtgagttc
gcccccgacacggtcggcatccagtggtgtgacgccgaggtgctacgaatgctgcgccgg
cgcagtctcgcggcgctacgccgggagatcgagccggtaccaccccgggcactggccacc
ttccttccccgctggcagcaggtcggtgcggcggcgcgggggctcccggcggtggccgcg
gccctggagcaggtgcagggtctggccctgcccggatccgccctggaacggctggtgttg
ccggcccgggtcggcgactactcccccgcccagctcgatgagctgtgcaccagcggcgag
gtggtgtgggccggctccggggcgatatccggcggggatggctgggtcgtcctcgcgtac
gcggacaccgccccgttgctgcttcccccgccggatgcggcgctggcccgcactccgctg
cacgatgcggtgctcgacgccctcgagggtggacaggcgctgttctttcgtgccctgtcc
gaccggttgggctccaccgacgacgccgcactcgccgctgtcatctgggatctggtgtgg
gccggtcacctcaccaacgacaccctcgccccgctgcgggccctgctggccggccgtggg
gcgcaccggtcccgtccggccgcgccccgtacccgctaccggcgacccggccgcgtcgcc
ctgccatcgcgcagcggcccgcccacggtcgccggccgctggtcgcgcctgcccgaacgg
gacgccgacccgacccgccgcgccgcggccctcgccgacgtactgctggaacggcacggc
gtggtgactcggggtgcggtcgcggcggagcaggtgcccggcgggtacgccgccgtctat
ccggtgctgtccgcactggaggagcggggggccacccgtcgcggctacttcgtggagggg
ctgggggccgcacagttcgccgtacccggggcggtcgaccgactgcgtgcgctggccgac
ccggccgacggcgggcgggtccgagcgggcctggccctggtcctcgccgcgaccgacccc
gccaacccgtacggggcggcactgccctggccggaacgggtggtcgactctggggacggc
ggtgccaacccgaccgggcaccgggcgggccgcaaggccggtgccctggtggtgctggtc
tccggcgatctggtcctctacgtcgagcggggcggtcggacgctgctctccttcactgac
gacagggacctgctggcgaccgccggtaaggcgcttgccgacgccgtacagggtggagcc
cttgggacgatctcggtggaacgggccgacggcgaggcggtgcgctcgtcaccgctgcgc
gacgcgttgaccgccgccgggttccgggccaccccccgcgggctccgcctgcggggctga

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