Salinispora tropica: Strop_1681
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Entry
Strop_1681 CDS
T00504
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
stp
Salinispora tropica
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stp03032
]
Strop_1681
03400 DNA repair and recombination proteins [BR:
stp03400
]
Strop_1681
Enzymes [BR:
stp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Strop_1681
DNA replication proteins [BR:
stp03032
]
Prokaryotic type
DNA Topoisomerases
Strop_1681
DNA repair and recombination proteins [BR:
stp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Strop_1681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABP54145
UniProt:
A4X5J5
LinkDB
All DBs
Position
1919157..1921640
Genome browser
AA seq
827 aa
AA seq
DB search
MARRKGPKVDLSAFDQAGARVFDNPLVTEVSDSYLEYAFSVIHSRALPDARDGLKPVHRR
ILWSMYESGHRPDRGHVKSARVVGDVMGKYHPHSDVAIYDALVRLAQDFSLNAPLIDGHG
NFGSPDDGPAAARYTEARMSREAMLLVGELGEETVDLGPNYDGSLTQPTVLPAAFPNLLV
NGASGIAVGMATNMIPHNLGEVVSAARWLINHPDATLDKLMEFVPGPDLPTGGLLLGLDE
VRRAYETGRGVVRMRAKVEIGPIEGSRGRQAITVVELPYGIGAEKVIAAVTNEVTKTKRL
TGIADVKDLTDRENGTRLVIECKVGVNPQALLADLYRLTPLEQSFGVNNLVLVDGQPRTL
GLKALLEVFLAHRYEVVTRRSAYRKRRREERLHLVDGLLVALLDIDQVVKLIRGSEDAQA
AKDGLMRRFGLSEIQATYILDTPLRRLTRYDRLELEAEQEKLRGEITELSRLLDDPKVLR
KVVSTELAAVVRQFAAPRRTTLVDGDLKEVLAASVPAGPLEVADDPCQVILSSTGLVART
AAESEEAVEGHRRHGRVRHDAVRAVAHSTARGKVLLVTSGGRAFKVDVLPLPVLPDQSGT
VSLRGGMSAAELVPLAPGETVVGIAPLGAPAEGSPGLALGTRQGMVKVCAPDWPVRADEF
EVISLRDGDEVVGTTWLTDGAESLAFVTSEASLLRYPVGLVRPQGLRGGGVAGVSLPGDA
RVVYFGAVRTDDPAHGEPMVVTSTGATVKVTPFAAYPAKGRATGGVRSQRFLKGETEAAV
AWVGPRPVGATANGEPVELPAADPRRDGSGFAVLLGPAVIGHQIDRD
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccgcaagggcccgaaggtcgacctgtccgcgttcgaccaggcgggtgcacgg
gttttcgacaatccgctggtcaccgaggtctccgactcctacctggagtacgcgttctcg
gtcatccactcccgcgccctgccggacgcccgagacgggctcaagccggtgcaccggcgc
atcctctggtcgatgtacgaatccggccaccgcccggaccgggggcacgtcaagtccgcg
cgggtggtcggcgacgtgatgggcaagtaccacccccacagcgacgtggcgatctatgac
gcgttggtccggctggcacaggacttctccctgaacgcgcccctcatcgacgggcacggc
aacttcggaagcccggacgacggtccggccgcggcccgatacaccgaagcccggatgtcg
cgggaggcgatgctgctcgtcggtgagttgggcgaggagacagtcgacctggggccgaac
tacgacggttcgttgacccagcccaccgtgctgccggcggccttcccgaacctgctggtc
aacggcgcctcggggatcgcggtcgggatggcgaccaacatgatcccgcacaacctgggc
gaggtggtctccgccgcccgctggctgatcaaccacccggacgccacgctggacaagctg
atggagttcgttccggggccggatctgccgaccggcggtctgctgctcggcctggacgag
gtgcggcgggcatacgagaccggccgaggtgtggtgcggatgcgcgccaaggtggagatc
ggcccgattgagggcagccgtggtcggcaggcgatcaccgttgtcgagctgccctacggc
atcggcgccgagaaggtcatcgccgccgtcaccaacgaggtcacgaagaccaaacggctc
accgggatcgccgatgtcaaggacctcaccgaccgggagaacggcacccggctggtcatc
gagtgcaaggtcggagtgaatccgcaggcgctcctcgccgatctctaccggctgaccccg
ctggagcagtcgttcggcgtcaacaatctggtgctggtggacgggcagccgcggaccctg
gggctcaaggccctactggaggtcttcctggcccaccggtacgaggtggtgacccggcgc
agcgcgtaccggaagcgtcggcgggaggagcggctgcacctggtggacgggctgctggtc
gcgctgctcgacatcgaccaggtcgtcaagctgatccggggcagcgaggacgcgcaggcc
gcgaaggacggtctcatgcggcgcttcgggctctccgagatccaggcgacctacatcctc
gacacaccgctgcgccggctcaccaggtacgaccggttggagctggaggccgagcaggag
aagctgcgcggcgagatcactgagctgtcccggctcctggacgacccgaaggtcctgcgg
aaggtcgtctccaccgaactggccgcggtggtgaggcagttcgcggcgccgcgccgcacc
accttggtcgacggggatctgaaggaggtgctcgccgcgtccgtgccggccggcccactg
gaggtcgccgacgatccctgccaggtgatcctctcgtcgaccggactggtcgcccggacc
gccgccgagtcggaggaggcggtcgagggacatcgccggcatggccgggtccggcacgac
gcggtacgcgccgtcgcccactccacggcccgcggcaaagttctgctggtcaccagtggc
ggccgggcgttcaaggtggacgtgctgccgctgccggtgctacccgatcagtccggcacg
gtctccctgcgcggcgggatgtccgcagccgagttggtgccgctggcgccgggggagacg
gtggtcgggatcgcgccgctcggtgcgcccgcggagggatcgccggggctggccctcggc
acccggcagggcatggtgaaggtctgtgcgccggactggccggtgcgcgccgacgagttc
gaagtgatcagcctccgcgatggggacgaggtggtcgggaccacctggctgaccgacggc
gccgagagcctcgccttcgtcacctcggaggcgtcgttgctgcgttacccggtggggttg
gtccgtccgcaggggctgcggggcggtggtgtcgccggggtgagcctccccggggacgcg
cgagtggtctatttcggcgcggtccgcaccgacgaccccgcccacggtgagccgatggtg
gtcacctcgaccggcgccacggtgaaggtgacgccgtttgcggcctacccggcgaagggg
cgggcgacgggcggcgtgcgctcccagcgtttcctcaagggggagacggaggcggccgtt
gcctgggtcggcccgcgtccggtcggtgcgacggcgaacggcgagccggtggaactgccg
gcggctgacccgcgccgcgacggcagcggtttcgctgtgctgctcggccccgccgtcatc
ggccatcagatcgaccgcgactga
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