Salinispora tropica: Strop_1810
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Entry
Strop_1810 CDS
T00504
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
stp
Salinispora tropica
Pathway
stp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Strop_1810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stp03400
]
Strop_1810
Enzymes [BR:
stp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Strop_1810
DNA repair and recombination proteins [BR:
stp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Strop_1810
RecFOR pathway proteins
Strop_1810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_16
AAA_5
AAA_22
Mg_chelatase
TIP49
AAA_18
nSTAND3
AAA_14
AAA_3
TsaE
Zeta_toxin
RNA_helicase
AAA_28
NTPase_1
IstB_IS21
Rad17
AAA_33
DUF815
AAA_25
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ABP54273
UniProt:
A4X5X3
LinkDB
All DBs
Position
2069709..2070773
Genome browser
AA seq
354 aa
AA seq
DB search
MTGDNLVSAYVSDAERDVEASVRPRRLAEFIAQERVRDQLDLLLQGALRRGSPPDHILLS
GPPGLGKTSLANIVAAELGTSIRVTSGPAIERSGDLAAILTSLGEGDVLFIDEVHRIARP
AEELLYSAMEDFRVDVVVGKGPGATAIPLDVEPFTLVGATTRAGLLTGPMRDRFGFVAHL
DFYSPADLETLLNRSARILGVPITADGAAEISGRARGTPRIANRLLRRVRDFAEVRADGV
VTRETAQAALTVYDVDALGLDRLDRAVLTALVDLFRGGPVGLSTLAVAVGEQPDTVEEVC
EPFLVRAGLLARTPRGRVATEAAWHHLGRTPANGTFGPDVPPARDLFSVEPDQP
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtgacaatctggtctcggcgtatgtgagcgacgccgagcgggacgtggaggcc
agcgtccggccgcgccggctggccgagttcatcgcgcaggagcgggtccgggatcaactc
gacctgctgctccagggcgcgctacgccgaggcagtccgcccgatcacatcctcctgtcg
ggcccgccggggctgggtaagaccagcctcgccaatatcgtcgccgccgagttgggcacg
agtatccgggtgaccagcggaccggcgatcgagcgttccggtgacctggcggccatcctg
accagtctcggtgagggggatgtgctcttcatcgacgaggtgcaccggatcgcccggccg
gcggaggaactcctctacagcgcgatggaggacttccgggttgacgtggtggtgggtaag
ggccccggggcaacagccatcccgctggatgtggagccgttcaccctggttggcgcgacc
acccgcgccgggctgctcaccggcccgatgcgggaccggttcggtttcgtcgcgcacctg
gacttctactccccggccgacctggagacgctgctcaaccgctcggcccgcatcctcggt
gtgccgatcaccgccgacggcgcggccgagatctccggccgcgcgcggggcaccccccgg
atcgcgaaccggttgctgcgccgggtgcgcgatttcgccgaggtccgggccgacggcgtg
gtcacccgggagaccgcgcaggcggcactcaccgtgtacgacgtggacgcgttggggctg
gaccggctggaccgagcggtgctcaccgcgctcgtggatctgttccggggtggtccggtc
ggcctgtccacgttggcggtggcggtgggggagcagccggacaccgtggaggaggtctgt
gagccgttcctggtgcgggccggtctcctcgcccgaacaccgcgtggtcgggtcgccacc
gaggcggcctggcaccatctggggcgtacgccagcgaatggtacatttggcccggatgtc
cctcccgcgcgtgacctgttctcggtggagcctgatcagccgtga
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