Salinispora tropica: Strop_2875
Help
Entry
Strop_2875 CDS
T00504
Name
(GenBank) transcriptional regulator, AraC family with amidase-like domain
KO
K13633
AraC family transcriptional regulator, transcriptional activator FtrA
Organism
stp
Salinispora tropica
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
stp03000
]
Strop_2875
Transcription factors [BR:
stp03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Strop_2875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
TetR_N
HTH_AsnC-type
HTH_Tnp_ISL3
HTH_31
HTH_20
HTH_IclR
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ABP55315
UniProt:
A4X8W5
LinkDB
All DBs
Position
complement(3287371..3288363)
Genome browser
AA seq
330 aa
AA seq
DB search
MSLESSQPVASTQPHRVVVIVDENSNPFELGCATEVFGLRRPEVGRDLYEFRLCSTEPST
LMRDGFFTLTGVYGLEAADTADTVIVPNRPDTDVPRRPAVLDAIRRAHARGRRLVGFCSG
AFTLAEAGVLDGRRATTHWQWADSFRDRFPAVRLEENVLFVDDGDILTAAGSAAALDLGL
HIVRRDHGVQVANSVSRRLVFAAHRDGGQRQFIERPMLDIPDESLAPTLAWAQERLDAPL
TVADLARHASVSPATLHRRFQAQLGTTPLAWLTRERLNLACRLIEQGESRLEVVARHSGV
GTTANLRTLMRRETGLAPSQYRRRFSPGAV
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctagaatcctcgcagccagtcgcttcgacgcagccccaccgcgtcgtcgtcatc
gtggacgagaactcgaaccccttcgagcttggctgcgcaaccgaggtcttcggtctgcgt
cgacccgaggtcggtcgcgatctgtacgaattccggctctgctcgaccgagccgagcacg
ctgatgcgggacggcttcttcaccttgaccggcgtctacggtctcgaggcggccgacacg
gcagacaccgtgatcgtccctaatcggcccgacactgacgttccccgccgccctgccgta
ctcgatgccatacggcgggcacacgcacgcggtaggagactggtcggcttctgcagcggt
gccttcacccttgccgaggccggagtgctcgacgggcgacgggcgaccacacactggcag
tgggcggactcgttccgggaccgcttcccggccgtccggctcgaagagaacgtactgttc
gtggacgacggcgacatcctcaccgctgcgggcagcgcggcggcccttgacctcgggctg
cacatcgtccgccgagaccacggcgtgcaggtcgccaattcggtcagtcgacggctggtc
ttcgcggcacaccgcgacggcggccaacggcagttcatcgagcggcccatgctcgacatt
cccgacgagtccctcgcgcccaccctggcatgggcccaggagcggctggacgcgccgttg
accgttgctgacctggcgaggcatgcttcggtcagtccggcgacgctgcaccgccgcttt
caagcgcagttgggcacaacgccgctggcctggctcactcgggaacgcctcaacctggca
tgtcgactgatcgagcaaggtgagtcacgcctcgaggtggtcgcgcggcacagcggggtc
ggcaccaccgccaacctgcgcacgttgatgcgccgcgagacggggctagctccctcgcag
taccggcgccggttcagccctggagcggtctag
DBGET
integrated database retrieval system
