Salinispora tropica: Strop_3145
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Entry
Strop_3145 CDS
T00504
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
stp
Salinispora tropica
Pathway
stp03030
DNA replication
stp03410
Base excision repair
stp03420
Nucleotide excision repair
stp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Strop_3145
03410 Base excision repair
Strop_3145
03420 Nucleotide excision repair
Strop_3145
03440 Homologous recombination
Strop_3145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stp03032
]
Strop_3145
03400 DNA repair and recombination proteins [BR:
stp03400
]
Strop_3145
Enzymes [BR:
stp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Strop_3145
DNA replication proteins [BR:
stp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Strop_3145
DNA repair and recombination proteins [BR:
stp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Strop_3145
NER (nucleotide excision repair)
GGR (global genome repair) factors
Strop_3145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
ABP55579
UniProt:
A4X9K5
LinkDB
All DBs
Position
complement(3609210..3611909)
Genome browser
AA seq
899 aa
AA seq
DB search
MTATKPRLLLVDGHSLAYRAFFALPVENFSTTTGQPTNAVYGFTSMLINVLRDEQPTHIA
VAFDVSRVSFRTEKYAAYKAGRSETPTDFKGQVSLVKEILAALRIPAVEMAGYEADDVIA
TLTRQARDQDMAVLITTGDRDAFQLVDDDVTVLYPRKGVSDLARMDPAAVTAKYGVPPQH
YRDLAALVGETSDNLPGVPGVGPKTAAKWITAYGGVEGVVARADEIKGKAGASLRERLAD
VIRNHELNCLVADLDLPLSPEETRWAGWDREAVHQVFDTLEFRILRDRLYQYLDAVEPEA
EAGFDLAGELLVEPGALAAWLGAHATPGTPVGLAVTLDTGPNRRHLADVTGMALATAAGA
GAWFDPGRLDAADEDALAGWLADVSRPKVLHDSKPAVLAFAARGCAIQGIARDTQIAAYL
ARPDQRSYDLTDLALRYLHRELRVDLPETGQLTLDGLGNDGEAEQNLMLRARATLDLADA
IDAELSRDGEQSARLMAEVELPLMRVLAGMERTGIAADTQYLSELEAHFAAEVKAAAQGA
YEAVGREFNLGSPKQLQEILFGELGLPKTKRIKTGYTTDADALQWLYGQNPHPVLGHLLR
HRDVAKLKTTVDGLLKSVSDDGRIHTTFNQTVAATGRLSSTEPNLQNIPIRTEEGRRIRR
AFVVGTGYECLLTADYSQIEMRIMAHLSADEALIDAFNSGLDFHAATASSVFQVPVEAVT
ADQRRKIKAMNYGLAYGLSAFGLSQQLGVTAEEARGLMETYFAGFGGVRDYLQEVVARAR
RDGYTESVLGRRRYLPDLVSDNRQRREMAERMALNAPIQGSAADIIKVAMMNVDAAVREA
GLRSRMLLQVHDELVFEVAPGEREALEALVRREMGGAFPLSVPLEVSVGDGRDWNSADH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
gtgacagccacgaagccgcgcctactcctcgttgacggacactccctggcttaccgggca
ttcttcgccctgccggtcgagaacttctccaccacgacggggcaaccgaccaacgcggtc
tacggcttcacctccatgttgatcaacgttctccgggacgagcagccaacgcacatcgcc
gtggccttcgacgtctcccgagtctccttccgcaccgagaagtacgcggcgtacaaagcc
ggccgcagcgagaccccgacagatttcaagggtcaggtcagcctggtcaaggagatcctg
gcggcgttgcgcatcccggcggtggagatggcgggctacgaggcggacgacgtgatcgcc
acgctcacccgtcaggcccgtgatcaggacatggcggtcctgatcaccaccggtgaccgg
gacgccttccaacttgtcgacgacgatgtcactgttctctacccccgaaagggcgtttcg
gacctggcccggatggacccggctgcggtgacggcgaagtacggggtacctccgcagcac
tatcgggacctcgccgcgttggttggcgagaccagcgacaatctgcccggcgttccgggc
gtcggcccgaagaccgccgccaaatggatcaccgcctacggtggggtcgagggtgtcgtt
gcccgggccgacgagatcaagggcaaggccggggcgagtcttcgggagcgactcgccgac
gtgattcgtaatcacgagctcaactgcctggtcgccgacctggatctgcccctgtcaccg
gaggagacgcgctgggccggctgggaccgggaggcggtgcaccaggttttcgacacgctg
gagttccgtatccttcgggatcggctctaccagtacctggacgctgttgagccggaggcc
gaggcgggtttcgacctggccggtgagctcctcgtcgagccgggggcactcgccgcatgg
ctgggcgcgcacgcgacaccaggcacgccggtcggcctcgccgtcacgctcgacaccggg
cccaaccggcggcacctcgccgatgtgaccggcatggcgctggcaaccgccgccggggcc
ggggcgtggttcgaccccggccgactcgacgccgccgacgaggatgccctggcggggtgg
ctggccgatgtgagccgaccgaaggtgctgcacgacagcaaaccggcggtgctcgcgttc
gccgcgcgcgggtgcgcgatccagggcatcgccagggacacgcagatcgccgcctacctg
gcccggcccgatcagcgctcctacgacctgaccgacctggccctgcggtacctgcaccgg
gagctgcgggtggacctgccggaaactggccagctcaccctcgatggcctgggcaatgac
ggtgaggccgagcagaacctgatgctgcgggctcgggctaccctcgacctcgccgatgcg
atcgacgcggagttgtctcgcgatggtgagcagtcggcccggctgatggctgaggtggag
ctgccgctgatgcgggttctcgcgggtatggagcgcaccggcatcgccgctgacacgcag
tacttgtccgagttggaggcgcacttcgccgccgaggtgaaggccgccgcgcagggtgcg
tacgaggcggtcgggcgtgagttcaacctgggctccccgaagcagttgcaggagatcctc
ttcggcgagctgggcctgcccaagaccaagcggatcaagaccggttacaccaccgatgcg
gacgccctgcagtggctgtacgggcagaacccgcacccggtgctcgggcacctgctgcgc
caccgagacgtggcgaagctgaagaccacggtcgacgggctactcaagtcggtctccgac
gacggtcgaattcataccaccttcaaccagaccgtggcggcgaccggccggctctcctcc
accgagccgaacctgcagaacattccgatccgcaccgaggaggggcggcggatccgccgg
gcgttcgtggtcggcacggggtacgaatgcctgctcaccgccgactacagccagatcgag
atgcggatcatggcacacctgtccgcggatgaggctctgatcgacgccttcaactcgggc
ctcgacttccacgccgccaccgcctcgtcggtcttccaggtgccggtggaggcggtcacc
gccgaccagcggcgcaagatcaaggcgatgaactacggcctggcgtacgggctgagcgcg
ttcggcctctcccagcagctcggcgtcaccgccgaggaggcgcgcgggctgatggagacc
tacttcgccggtttcggtggggtgcgcgactatctgcaggaggtggtggcccgggctcgc
cgcgacggctacaccgagagcgtcctcggccgtcgccgctacctgcccgacctggtcagc
gacaaccggcagcggcgggagatggccgagcggatggcgctcaacgccccgatccagggc
tctgccgccgacatcatcaaggtggcgatgatgaacgtcgacgcagcggtgcgcgaggcc
gggctgcgttcccggatgctgctccaggtgcacgacgaactggtcttcgaggtggccccc
ggggagcgggaggcgctggaggcgttggtccggcgggagatgggcggggcgttcccgctg
tccgtgccgctggaggtgtcggtcggcgacgggcgggactggaacagcgccgaccactga
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