Salinispora tropica: Strop_3201
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Entry
Strop_3201 CDS
T00504
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
stp
Salinispora tropica
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
stp03009
]
Strop_3201
Enzymes [BR:
stp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
Strop_3201
Ribosome biogenesis [BR:
stp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Strop_3201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABP55635
UniProt:
A4XDN0
LinkDB
All DBs
Position
complement(3670057..3671001)
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AA seq
314 aa
AA seq
DB search
MTAAYATGGGQRSLPVPDGLDGLRLDQAVARLFGLSRTTAAALVDAGAALVDGTVRANSY
KIRAGSWLEVTLPAPAAPPAVVPQAVSGLRVVYADDDIVVVDKPVGVAAHPSPGWTGPTV
IGGLAAIGHRISTSGAAERQGVVHRLDVGTTGIMAVAKSEQAYTSLKRAFKYREVEKRYH
AVVQGHLDPLRGTIDAPIDRHPHHDYRWAVVSDGKPSITHYDTLEAFPAASLVDVRLETG
RTHQIRVHFSTLRHPCVGDLTYGADPTLATRLGLDRQWLHARELRFRHPRTGEEVCFVSD
YPDDLDRALGILRD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggcgtatgccaccggtggtggccaacgatcgctgccagtcccggacgggctc
gacgggctccgcctcgaccaggccgtcgcgcggctcttcgggcttagccggacgaccgcg
gcggccctggtcgacgcgggcgccgcactggtcgatggaacggtgcgggctaattcctac
aagattcgggccgggtcctggctggaggtgacactgccggcgccggcagctccgccggcg
gtcgtgccgcaggcggtgtccggcctgcgcgtcgtgtatgccgacgacgacatcgtggtg
gtggacaagccggtcggcgtggccgcccacccgagtcccggttggaccggaccgaccgtg
atcggtgggcttgccgcgatcggccaccggatctccaccagcggtgccgccgagcggcag
ggcgtggtgcatcggctcgatgtcggcacgaccgggatcatggcggtggccaagagcgag
caggcatacaccagcttgaagcgggcgttcaagtaccgcgaggtggagaagcgctaccac
gccgtggtgcaggggcatctcgacccgttacgcggcaccatcgacgctccgatcgatcgg
catccacaccatgactaccgctgggcggtggtctcggacggtaagcccagcatcacccac
tatgacaccctggaggcgttcccggcggccagcctggtggacgtacggctggagacgggc
cgtacgcaccagatccgagtgcacttctcgacgctgcgccacccctgcgtgggtgacctt
acctacggagccgatcccaccctcgccacgcggctcggcctggatcggcagtggcttcat
gcccgggagttaaggttccggcatccccgtacgggggaggaggtctgtttcgtcagcgat
taccctgacgatctggaccgcgctctgggaatcctgcgggactga
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integrated database retrieval system
