Salinispora tropica: Strop_3277
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Entry
Strop_3277 CDS
T00504
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
stp
Salinispora tropica
Pathway
stp00061
Fatty acid biosynthesis
stp00071
Fatty acid degradation
stp01100
Metabolic pathways
stp01212
Fatty acid metabolism
stp02024
Quorum sensing
stp04146
Peroxisome
Module
stp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Strop_3277
00071 Fatty acid degradation
Strop_3277
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Strop_3277
09145 Cellular community - prokaryotes
02024 Quorum sensing
Strop_3277
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
stp01004
]
Strop_3277
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stp04147
]
Strop_3277
Enzymes [BR:
stp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Strop_3277
Lipid biosynthesis proteins [BR:
stp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Strop_3277
Exosome [BR:
stp04147
]
Exosomal proteins
Exosomal proteins of breast milk
Strop_3277
Exosomal proteins of breast cancer cells
Strop_3277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Prot_ATP_ID_OB_C
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABP55711
UniProt:
A4X9X1
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All DBs
Position
3759273..3761072
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AA seq
599 aa
AA seq
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MREFSVPPIVTVGDSANLTDPVWENAEVAPDVVQFIRAGADGASTDVTCRQFRDEVVAVA
RGLVAAGVRPGDRVGLMSRTRYEWTLFDYAVWAAGAVTVPIYETSSPEQAAWILSDSGAV
AVLVETDAHAALVAGVRDRTPELTNVWQIDLGALDELVTAGESVDPTEIEQRRAAVHADD
LATLVYTSGTTGRPKGCMLTHRSMLADVANAVPVLPNLFGPGASTLLFLPLAHAFARLIQ
VGVVQARATMAHCPDTNDLLSRLQTVRPTFVLSVPRVFEKVYNSAKQKADASGKGRIFAR
AEAVAIAYSESLETSSGPGLALRVQHALFDRLVYRKLRAALGGRCSDAISGGAPLGARLG
HFFRGVGVVIYEGYGLTETSPAASANLPDAIRIGSVGRPLPGVTIRIDDDGEVLIAGDLV
FKGYWRNEAASADVLTADGWFRTGDLGQLDSDGYLRITGRKKEIIVTAGGKNVAPAVLED
QVRAHPMVSQCVVIGDRQPFVAALVTVDEEALPAWLEEAGLPATTPVEQLREHEGLRSEI
QSAIDAANRTVSRAEAIKVFRILPRDFTETTGELTPSLKVKRQIVHKSYATEIADIYRS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgagttctccgtcccaccgatcgtcaccgtcggcgactcggccaatctaaccgat
ccggtctgggaaaacgctgaggtcgccccagacgtggtgcagttcatccgtgcgggtgcc
gacggcgcctcgaccgacgtgacctgccgccagttccgcgacgaggtggtcgcggtggca
cgcggcctggtcgcagccggggtacggcccggcgaccgggtcgggctgatgagccgcacc
cggtacgagtggacgctgttcgactacgcagtctgggcggctggcgcggtcaccgtaccg
atctacgaaacctccagccccgagcaggccgcctggatcctgtccgactcgggagccgtc
gccgtactggtggagacggacgcgcacgccgcgctggtcgccggcgtgcgcgaccggacg
cccgagctgacgaacgtgtggcagatcgacctcggcgcactggacgagttggtcaccgcc
ggcgagtcggttgacccgaccgagatcgagcagcggcgcgcggccgtgcacgccgatgac
ctcgccaccctcgtctacaccagcggcaccaccggccgccccaaggggtgcatgctgacc
caccgcagcatgctcgccgacgtggccaacgccgtgccggtgctgcccaacctgttcggc
ccgggcgcctccaccctgctgttcctgccactcgcgcacgccttcgcccgactgatccag
gtcggtgtggtgcaggcccgcgccacgatggcccactgcccggacaccaacgacctgctc
tcccggttgcagacggttcgccccacgttcgtgctctccgtcccccgggtcttcgagaag
gtctacaacagcgccaagcagaaggcagacgcctccggcaagggccggatcttcgcccgt
gccgaggctgtcgccatcgcgtacagcgagtcgttggagacctctagcgggcccggcttg
gcgctccgcgtccagcacgcgctcttcgaccgactggtctaccgcaagctgcgggccgcg
ctgggcgggcggtgcagcgacgcgatctccggcggtgcgccactcggcgcgcggctcgga
cacttcttccgcggcgttggggtcgtcatctacgagggctacgggctgaccgaaacctcc
cccgccgcctccgccaacctgcccgatgccatccggatcggcagtgtcggccgcccactg
cccggggtgaccatccggatcgacgacgacggcgaggtccttatcgccggggacctggtc
ttcaagggctactggcgcaacgaggccgccagcgcggatgtgctcactgccgacggctgg
ttccgcaccggcgatctgggccaactcgacagcgacggctacctacggatcaccggccgg
aagaaagagatcatcgtgaccgcgggcggcaagaacgtcgctccggcggtccttgaggac
caggtccgggcgcacccgatggtcagccagtgcgtggtgatcggcgaccgacagcccttt
gtcgcggcgctggtcaccgtggacgaggaggcgttgccagcgtggctggaagaggctggc
ctgcccgcgacaaccccggtcgagcagctccgcgaacacgaggggctgcggtccgagatc
cagtccgcgatcgacgcggccaaccgcaccgtgtccagggctgaggccatcaaggtcttc
cgaatccttccccgggacttcaccgagacgaccggcgagctgaccccgtcccttaaggta
aaacgacaaatcgtgcacaagtcgtacgcgacggaaatcgccgatatctaccgaagctga
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