Salinispora tropica: Strop_3286
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Entry
Strop_3286 CDS
T00504
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
stp
Salinispora tropica
Pathway
stp03030
DNA replication
stp03430
Mismatch repair
stp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Strop_3286
03430 Mismatch repair
Strop_3286
03440 Homologous recombination
Strop_3286
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
stp03032
]
Strop_3286
03400 DNA repair and recombination proteins [BR:
stp03400
]
Strop_3286
Enzymes [BR:
stp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Strop_3286
DNA replication proteins [BR:
stp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Strop_3286
DNA repair and recombination proteins [BR:
stp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Strop_3286
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ABP55720
UniProt:
A4X9Y0
LinkDB
All DBs
Position
3770948..3772771
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AA seq
607 aa
AA seq
DB search
MRWRTLRSRGVRCRTGPLTCPPMAPQKYVQELLAGLDPAVGGVDPALPLYATTFVVVDLE
TTGGTPDGGGITEIGAVKVRGGEQLGVLATLVNPGTPVPPFVTVLTGITQSMLLPAPPIT
EVLPSFLEFLPPDAVLVAHNAPYDVGFLKAACAAHGYRWPSPRVLDTAALARRVLTRDEV
PNRRLGTLAAYFRTATRPTHRALDDALATVDVLHGLISRLGGHRVHTIGEAIEFARAVTP
TQRRKRHLAEGLPHSPGVYLFRGADNRPLYVGTSIDIATRVRSYFTAAEKRARISEMLAA
AERVEAVECAHSLEAEVRELRLIGTHAPPYNRRSKFPERVVWLKLTDEAYPRLSVVRNLA
PGDEAYLGPFTSRRAAELAAAGFHDAMPLRQCTHRLSVRKVTPACAVAELGRCPAPCEHR
ITPTEYADRATTPFRRACGDDPQGVVDALLGRIETLSAGQRYEEAAVVRSRLTAVLRAIT
RMQRLAALTGIAEVVAARPASDGGWELALVRHGRLAGAGVSPPGVHPRPTIATIRATAET
VSPGHGPTPATSAEETERILSWLERPETRLVEMSSAWASPIAGAGRFQTLLAKAANAASR
QFSTESP
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgcgatggcgaacgctgcgcagccggggggtgcggtgtcggaccgggccgttaacgtgc
ccgccaatggcaccacagaaatatgtccaggagttgttggccggtctcgacccagctgtc
ggcggcgttgatccggcgctaccgctctacgcgaccaccttcgtcgtggtcgacctcgag
accacgggcggtacgccggacgggggcggcatcaccgagatcggcgcggtgaaggtccgc
ggcggtgagcagctcggggtgctcgccaccctggtcaatcccggcacaccggtcccgccc
ttcgtcaccgtgctgaccggaatcacccagtcgatgctgctgcctgccccaccgatcacc
gaggtcctgccgagcttcctcgagttccttccccccgacgcggtcctggtcgcccacaac
gccccgtacgacgtggggttcctcaaggcggcctgcgcggcgcacggctatcgctggccg
agcccgcgggtgctggacacggcggcgctggcccgacgggtactgacccgtgacgaggtg
cccaaccgccgactcggcaccctcgcggcatacttccgcaccgccacccggcccacccac
cgggcgttggacgatgcgttggccaccgttgacgtgctccacggattgatctcccggctc
ggtggtcaccgggtgcacaccatcggcgaggcgatcgagttcgcccgggcggtcaccccc
acgcagcgccgcaagcggcacctcgccgaaggcttgccccactcgcccggggtctacctg
ttccggggcgccgacaaccgtccgctctacgttggcacctcgatcgacatcgccacccgg
gtccgcagttacttcacggccgcggagaagcgagctcggatctcggagatgctcgccgcc
gccgaacgggtggaggcggtggagtgcgcccactcactcgaggcggaggtgcgggagctg
cgcctgatcggcacacacgccccgccgtacaaccgacggtcgaagttccccgagcgggtg
gtctggctgaagctgaccgacgaggcgtacccacgactgtcggtggtgcggaacctggcc
ccgggggacgaggcctacctcgggcccttcacctcccgccgcgccgcggagctcgccgcg
gcgggcttccacgacgcgatgccgctgcggcagtgcacgcaccggctgtcggtacggaag
gtcacgccggcctgcgccgtggccgaactgggtcgctgcccggcaccctgcgagcaccga
atcaccccgacggagtacgcggatcgcgcgacgacgcccttccgtagggcgtgcggcgat
gatccgcagggcgtggtggacgccttgcttggccggatcgagacactctcggcgggacaa
cgctacgaggaggccgcggtggtgcggtcccggctgaccgccgtgctccgcgcgattacc
cggatgcagcgactcgccgcgctcaccgggatcgccgaggtggtggctgcccggccggca
tcggacggaggttgggagttggcactggtgcggcatggacggctggccggcgccggcgtg
tctccgcccggggtccacccacgaccaacaatcgccacgatccgggcgaccgcggagacc
gtctccccaggccacggaccgactccggccaccagcgccgaggagaccgagcgcatcttg
tcctggttggagcgtccggagacccggttggtggagatgtcgtccgcctgggcctccccg
atcgccggtgcgggccggttccaaaccctgctggcgaaggcggcaaacgccgcttcccgc
caattctcgaccgaaagcccatga
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