Salinispora tropica: Strop_3652
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Entry
Strop_3652 CDS
T00504
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
stp
Salinispora tropica
Pathway
stp00300
Lysine biosynthesis
stp00470
D-Amino acid metabolism
stp01100
Metabolic pathways
stp01110
Biosynthesis of secondary metabolites
stp01120
Microbial metabolism in diverse environments
stp01230
Biosynthesis of amino acids
Module
stp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Strop_3652
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Strop_3652
Enzymes [BR:
stp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Strop_3652
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Paralog
Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
GCH_III
Motif
Other DBs
NCBI-ProteinID:
ABP56083
UniProt:
A4XAY4
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All DBs
Position
complement(4184695..4186107)
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AA seq
470 aa
AA seq
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MRAHEAGALHGEIGSQGAAWLRVPRDVNALVPALWPRTVSRAADGALAVAGCSVRDLAAE
FGTSVYLLDEEDLRSRCRDFRAAFPTEDVYYAGKAFLCRAVARMVAEEGLHLDVCSGGEL
ATALAAGVPPERIGFHGNNKSIAELSRALDVGVGRIIVDSSHEIDRLTALARERGVRPRV
LVRVTVGVEAHTHEFIATAHEDQKFGFSLAEGAAIAAVLRILDEDVLELRGLHSHIGSQI
FDASGFEVSARRVLALQAQIRDARGVQLPELDLGGGFGIAYTSQDDPATPADLAKRLRKI
VDGECAAERLAVPHLSIEPGRAIVGPAMFTLYEVGTVKSVPVGTGGDAVDGRRCYVSVDG
GMSDNIRTALYDASYSATLASRASVAEPVLARVVGKHCESGDIVVKDEFLPADVQPGDLV
AVPGTGAYCRSMASNYNHVPRPPVVAVRDGRARLIVRRETEEDLLALDVG
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
gtgcgagcacacgaggccggcgccctgcatggggagatcggcagccagggggcggcgtgg
ctgcgtgtcccgcgggacgtgaacgcgttggtgccagcgctgtggccgcgtaccgtcagc
cgggcggcggacggcgcgctcgccgtcgcgggctgctcggtgcgggatctcgcggccgag
ttcggcacctcggtgtacctcctggacgaggaggacctgcggagtcgctgccgggacttc
cgggctgccttcccgaccgaggatgtctactacgccggtaaggcgttcctctgccgggcg
gtggcgcggatggtcgccgaggagggcctgcacctggacgtgtgcagtggtggcgagttg
gccactgcgctggctgccggggtgccgccggagcggatcggcttccacggcaacaacaag
tcgatcgccgagctgagccgggcgttggatgtcggggtggggcggatcatcgtcgactca
tcccacgagatcgaccgactcaccgcgctggctcgcgagcggggtgtccgcccgcgggtg
ctggtgcgggtcaccgtcggcgtggaggcgcacacccacgagttcatcgccaccgcgcac
gaggaccagaagttcggcttctcgttggcggagggcgcggcgatcgccgccgtgctgcgc
atcctcgacgaggacgtgttggagctgcgcggtctgcactcgcacatcgggtcgcagatc
ttcgacgcgagcggcttcgaggtctccgcccgccgggtgctggcgctgcaggcgcagatc
cgcgacgcgcggggggtacagctaccggagctggacctgggcggcgggttcggtatcgcg
tacacctcgcaggacgatccggccacgccggccgatctggcgaagcgtctacgcaagatc
gttgacggggagtgcgccgccgagcggctggcggtgccgcacctgtcgatcgagccgggc
cgggcgatcgtcggcccggccatgttcacgctctacgaggtgggcacggtcaagtccgtg
ccggtcggcaccggtggtgacgcggtcgatgggcgccgttgttatgtgagtgtcgacggc
ggcatgagcgacaacatccgcacagcgctctacgatgcgtcgtactcggcgaccctggcg
tctcgagcgagcgttgccgagccagtgcttgcccgcgttgtgggaaagcactgtgagtcc
ggggacatcgtggtgaaggatgaattcctgcccgccgacgtgcagccgggagatcttgtc
gccgtgcccggcacgggtgcgtactgccggagcatggccagcaactacaaccatgtgcca
cgccccccggtggtcgcggtgcgcgacggccgggctcgcctgatcgtccgccgggaaacc
gaagaggacctgctcgctttggatgtgggatga
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