Salinispora tropica: Strop_3739
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Entry
Strop_3739 CDS
T00504
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
stp
Salinispora tropica
Pathway
stp03420
Nucleotide excision repair
stp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Strop_3739
03430 Mismatch repair
Strop_3739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stp03400
]
Strop_3739
Enzymes [BR:
stp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Strop_3739
DNA repair and recombination proteins [BR:
stp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Strop_3739
MMR (mismatch excision repair)
Other MMR factors
Strop_3739
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ABP56170
UniProt:
A4XB71
LinkDB
All DBs
Position
complement(4282291..4284450)
Genome browser
AA seq
719 aa
AA seq
DB search
MVSHSASDRVLAGLDPEQRAAVTAPAGPVCVLAGAGTGKTRAVTSRIAHRTLTGEILARH
LLAVTFTARAAAELRSRLTALGVPGVQARTFHAAALRQVRYFAPRLLAGRAMPELLDSKV
RLVTLAAAKVGIRSDRAGVRDLAGEIEWAKSSLVEPGEYVVAAARALRDTPYEPARVADV
FAAYEKAKRAGGVIDFEDMLRAAIWGIEDHPDVADQVRAQYRHFVVDEYQDVNPLQQRLL
EAWLGGGDDLTVVGDASQTIYSFTGATSSYLVDFPRRYRGATVVRLVRDYRSTPQVVGLA
NSVIAPARGAEARLRLELVGQRPPGPEPELRIFTDEPAEAAAVAARCRALVDAGTPAREI
AVLFRTNAQSEAYEEALTEAEVPYQVQGAERFFERVEVRQAMVALRAATRSLPGGTPLPA
AVVEALAAVGWAPDTPPAGGAARERWAALAALVQLAEEYAANAPVLPIGPAAAVERPATL
ADFTDELARRAAAQHVPTVEGVTLASLHSAKGLEWDAVFLVGLAEGTLPTTYAKTPEQVE
EERRLLYVGITRAREWLWLSYASARSPGGRPRRPCRFLPRLDSSGTSVRAGASGVRRTER
RRTQIVSCRVCGTTLLAGAERKLGRCTACPSDMDKELHGRLGEWRRRVAGGQRVPDYVVF
TDATLVALAERRPQQPRDLTAIAGIGSRKLGLYGEAVLALVAGATVDEVCPERTFKILP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtggtgtcccactcagcgtccgaccgggtgctcgccggcctcgacccagagcagcgggcg
gcggtgaccgctccggccggcccggtctgcgtcctggccggtgccggcaccgggaagacc
agggcggtcacctcccggatcgcccatcggacgttgaccggggagatcctggcccggcac
ctgctcgcggtcaccttcaccgcgcgggccgccgccgagctgcgcagccggctcaccgcg
ctcggggtaccgggtgtacaggcgcgcaccttccacgcggcggcgctgcgtcaggtgcgg
tacttcgcgccccggctgctcgccggtcgggcgatgcccgaactgctggacagcaaggtc
cggctggtcaccctcgccgcggcgaaggtcgggatccgctccgaccgggccggtgtccgg
gacctcgcgggcgagatcgagtgggcgaagtcgtccctggtcgagcccggggagtacgtg
gtcgcggctgcccgggcgctgcgggacaccccgtacgagccggcgagggtggccgatgtc
ttcgccgcgtacgagaaggcaaaacgcgccggtggggtgatcgatttcgaggacatgctg
cgtgccgcgatctggggaatcgaagaccacccggacgtggccgaccaggtacgcgcccag
taccggcacttcgtcgtcgacgagtaccaggacgtcaacccgctccagcagcggctgctg
gaggcgtggctcggtggcggagacgacctgacggtggtgggtgacgcaagccagacgatc
tactcgttcaccggtgcgacctcgtcctacctggtcgacttcccccgtcggtaccgtggt
gcgacggtggtccgtctggtgcgcgactatcgctccacccctcaggtggtcgggctggcc
aactcggtcatcgcaccggcccggggcgccgaggcgcggcttcggctggagctggtcggc
cagcgcccgccgggccccgagcccgagttacggatcttcaccgacgagccggccgaggcc
gccgccgtcgccgcccgctgccgtgccctggtggacgccggcacaccggcccgggagatc
gccgtgctgtttcggaccaacgcgcagtccgaggcgtacgaggaggcgctgaccgaggcc
gaggtgccgtaccaggtgcagggcgcggagcggttcttcgagcgcgtcgaggtacggcag
gcgatggttgcgctgcgcgccgccacccgttcccttcccggtggaaccccgctgccggcg
gccgtggtcgaggcgttggccgcggtgggctgggcaccggatacaccgccagccggtggg
gctgcccgggaacggtgggcggccctcgccgccctggtccagctcgccgaggagtacgcc
gccaacgccccggtgctgccgatcgggccggccgccgcggtcgagcggccggccacgctg
gccgacttcaccgacgagctggcccggcgcgccgccgcgcagcacgtgccgacggtcgag
ggcgtgacactcgcctcgctgcattcggcgaagggtctggagtgggatgccgtcttcctg
gtcggcctcgccgagggcaccctgcccaccacctacgcgaagacaccggagcaggtggag
gaggagcgccggttgctctacgtgggcatcacccgggctcgggagtggctctggttgtcg
tacgcctcagctcgctcaccgggagggcgtcctcggcggccctgtcgcttcctgccccgg
ctggactcctccggcaccagtgtgcgggctggcgcgagcggggtacggcggaccgagcgt
cggcgtacccagatcgtctcctgccgggtctgcggtacaactcttctcgccggcgcggag
cgtaagctgggccgctgcaccgcctgtccatccgacatggacaaggagctgcacgggcgg
ctgggcgagtggcggcgtcgggtggccggcggccagcgggtaccagactacgtggtgttc
accgacgcgacattggtcgcgttggcggagcggcgcccgcagcagccccgcgacctcacc
gcgatcgcgggaatcggttcccggaagctggggctctacggggaggcggtgctggccctg
gtagctggcgcgacggtggacgaggtctgcccggagagaactttcaaaatcttgccctaa
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