Salinispora tropica: Strop_3841
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Entry
Strop_3841 CDS
T00504
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
stp
Salinispora tropica
Pathway
stp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Strop_3841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stp03019
]
Strop_3841
03110 Chaperones and folding catalysts [BR:
stp03110
]
Strop_3841
03029 Mitochondrial biogenesis [BR:
stp03029
]
Strop_3841
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stp04147
]
Strop_3841
Enzymes [BR:
stp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Strop_3841
Messenger RNA biogenesis [BR:
stp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Strop_3841
Chaperones and folding catalysts [BR:
stp03110
]
Heat shock proteins
HSP60 / Chaperonin
Strop_3841
Mitochondrial biogenesis [BR:
stp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Strop_3841
Exosome [BR:
stp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Strop_3841
Exosomal proteins of other body fluids (saliva and urine)
Strop_3841
Exosomal proteins of breast cancer cells
Strop_3841
Exosomal proteins of colorectal cancer cells
Strop_3841
Exosomal proteins of bladder cancer cells
Strop_3841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
GhoS
Motif
Other DBs
NCBI-ProteinID:
ABP56271
UniProt:
A4XBH2
LinkDB
All DBs
Position
complement(4401307..4402938)
Genome browser
AA seq
543 aa
AA seq
DB search
MAKILSFSDDARHQLEHGVNALADAVKVTLGPRGRNVVLDKKFGAPTITNDGVTIAKEIE
LTDPHENLGAQLVKEVATKTNDVAGDGTTTATVLAQALVREGLRNVAAGANPTGLKRGID
AAATKVSEALLGKAVEVSDKAAIAHVATVSAQDSTIGELIAEAMERVGRDGVITVEEGST
LATELDVTEGLQFDKGFISPNFVTDAEGQESVLEDPYILITTQKISAIEELLPLLEKVLQ
DSKPLLIIAEDVEGQALSTLVVNALRKTMKVCAVKAPGFGDRRKAMLQDMAILTGAELVA
PELGYKLDQVGLEVLGTARRVVVDKETTTVVDGGGQAADAADRVAQIRKEIEASDSEWDR
EKLAERLAKLSGGVAVIRAGAATEVEMKERKHRIEDAIAATKAAVEEGTIPGGGAALAQV
LPALDDDLGLDGDEKVGVSIVRKALVEPLRWIAQNAGHDGYVVVQKVVDKDWGHGLDAAT
GEYVDLAKAGILDPVKVTRNAVANAASIAGLLLTTESLVVDKPQEPEPAAGGHGHGHQHG
PGF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgagcttctcggacgacgctcggcaccagctggagcacggtgtcaac
gccctcgcggatgcggtcaaggtcaccctcggcccccgcgggcgcaacgtcgtcctggac
aagaagtttggtgcacccacgatcaccaacgacggcgtgacgatcgccaaggagatcgag
ctcaccgacccgcacgagaacctcggcgcgcagctggtcaaggaggtggcgaccaagacc
aacgacgtcgccggcgacgggaccaccaccgccaccgtgctggcccaggcgttggtccgg
gagggcctgcgtaacgtggcggccggcgccaacccgaccggcctcaagcggggtatcgac
gcggcggccaccaaggtctccgaggcgctgctcggcaaggccgtcgaggtgtcggacaag
gcggcgatcgcgcacgtcgcgaccgtctccgcgcaggactccacgatcggtgagctcatc
gccgaggcgatggagcgggtcggccgcgacggtgtcatcaccgtcgaggagggctccacc
ctcgccaccgagctggacgtgaccgagggtctccagttcgacaagggcttcatctcgccc
aacttcgtcactgacgcggaggggcaggagtcggtcctggaggacccgtacatcctcatc
accacgcagaagatctcggcgatcgaggagctgctaccgctgctggagaaggtcctccag
gacagcaagccgctgctcatcatcgccgaggacgtcgagggccaggcgctgtccacgctg
gtggtcaacgcgctccgcaagaccatgaaggtctgcgcggtgaaggctcccggcttcggt
gaccgccgcaaggcgatgttgcaggacatggcgatcctgaccggtgccgagctggtcgcc
cccgagctgggctacaagcttgaccaggtcgggctggaggtgctcggcaccgctcgccgg
gtggtggtcgacaaggagaccaccaccgtcgtcgacggcggcggccaggccgccgacgcc
gcggaccgggtcgcccagatccgcaaggagatcgaggcttcggactccgagtgggaccgg
gagaagctcgccgagcggctggccaagctctccggtggcgttgccgtgatccgggcgggc
gcggcgaccgaggtcgagatgaaggagcgcaagcaccgcatcgaggacgccatcgccgcc
accaaggccgcggtcgaggagggcacgatccccggcggcggtgccgccctggcccaggtc
ctgccggcgctcgacgacgacctcggcctcgacggggacgagaaggtcggcgtctcgatc
gtgcgcaaggcgctggtcgagccgctgcgctggatcgcccagaacgccggccacgacggc
tacgtggtggtgcagaaggtcgtcgacaaggactggggccacggcctcgacgcggctacc
ggcgagtacgtcgacctggcaaaggctggcatcctcgacccggtgaaggtgacccgcaac
gcggtcgccaacgccgcgtcgatcgcgggcctgctgctcaccaccgagagcctcgtggtg
gacaagccgcaggagccggagccggccgcgggtggccacggccacggtcaccagcacggc
ccgggtttctga
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integrated database retrieval system
