KEGG   Salinispora tropica: Strop_3969
Entry
Strop_3969        CDS       T00504                                 
Name
(GenBank) Ku domain protein
  KO
K10979  DNA end-binding protein Ku
Organism
stp  Salinispora tropica
Pathway
stp03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:stp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Strop_3969
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:stp03400]
    Strop_3969
DNA repair and recombination proteins [BR:stp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Strop_3969
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: ABP56399
UniProt: A4XBU2
LinkDB
Position
4520806..4521840
AA seq 344 aa
MRAIWKGAVSFGLVSIGVKLYSATEEKDIRFHQVHRDDGGRIRYKRTCQVCGEEVTYDDI
VKGYDLGGGELVILTDDDFADLPLSTSRAIDVLEFVPAEQVDPILYNKAYFLEPEGTATK
PYVLLRNALTDSERVAIVKVAIRQREQLATLRVHQGVLLLNTMLWPDEIRKPEFGFLDED
LKVRPPELAMASSLIGSMAGDFQPDVFTDDYRTALQEVIDAKVEGREIVQPEEAEEAPAA
AVDLMAALKASVERAQAARGEKPAGPGAGEPTPISAARSAQRKATEQQAPPKKATGKKSE
KATPEKKKPAEKKPATKTTAKKGEGKQAEPAKKSPARKGTRKTA
NT seq 1035 nt   +upstreamnt  +downstreamnt
gtgcgggccatttggaaaggagccgtgtcgttcgggctcgtctcaatcggggtcaagctg
tattcggcgaccgaggaaaaggatattcggttccaccaggtgcaccgagatgacggcggc
cgaatccgctacaagcgcacctgccaggtctgcggcgaggaggtcacctacgacgacatc
gtcaaggggtacgacctcggcggcggtgagctggtcatcctcaccgacgacgacttcgcc
gacctgccactgagcacctcacgggcgatcgacgtgctggagttcgtccccgccgagcag
gtcgatccgattctctacaacaaggcatacttcctcgagccggagggcaccgccaccaag
ccgtacgtgctgctgcgcaacgcgctcaccgactccgaacgggtggccatcgtcaaggtg
gcgatccgccaacgtgagcaactcgcaacgttgcgggtgcaccagggcgtactactgctc
aacacgatgctctggcccgatgagatccggaagcccgagttcggctttctcgacgaggac
ctgaaggtccggcccccggaactggcgatggccagctcactgatcggctcgatggcgggt
gacttccaacccgatgtcttcaccgacgactaccggaccgccctgcaggaggtcatcgac
gcgaaggtggagggccgcgagatcgtccagccggaggaggccgaagaggcgccggcggcg
gcggtggacctgatggcggcgctgaaggcatcggtggagcgggcccaggcggcgcgcggc
gagaagcccgccggtcccggcgcgggcgaaccgaccccgatctcggcggcgcgttccgcc
cagcggaaggccaccgagcagcaggccccgccgaagaaggccaccggcaagaagagcgag
aaggcgactcccgagaagaagaagccagccgagaagaagccagcgaccaagacgaccgcg
aagaagggtgagggaaagcaggcggagccggccaagaagtcgccggcccgcaagggcacc
cgcaagaccgcctga

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