Salinispora tropica: Strop_3969
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Entry
Strop_3969 CDS
T00504
Name
(GenBank) Ku domain protein
KO
K10979
DNA end-binding protein Ku
Organism
stp
Salinispora tropica
Pathway
stp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Strop_3969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stp03400
]
Strop_3969
DNA repair and recombination proteins [BR:
stp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Strop_3969
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
ABP56399
UniProt:
A4XBU2
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All DBs
Position
4520806..4521840
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AA seq
344 aa
AA seq
DB search
MRAIWKGAVSFGLVSIGVKLYSATEEKDIRFHQVHRDDGGRIRYKRTCQVCGEEVTYDDI
VKGYDLGGGELVILTDDDFADLPLSTSRAIDVLEFVPAEQVDPILYNKAYFLEPEGTATK
PYVLLRNALTDSERVAIVKVAIRQREQLATLRVHQGVLLLNTMLWPDEIRKPEFGFLDED
LKVRPPELAMASSLIGSMAGDFQPDVFTDDYRTALQEVIDAKVEGREIVQPEEAEEAPAA
AVDLMAALKASVERAQAARGEKPAGPGAGEPTPISAARSAQRKATEQQAPPKKATGKKSE
KATPEKKKPAEKKPATKTTAKKGEGKQAEPAKKSPARKGTRKTA
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgcgggccatttggaaaggagccgtgtcgttcgggctcgtctcaatcggggtcaagctg
tattcggcgaccgaggaaaaggatattcggttccaccaggtgcaccgagatgacggcggc
cgaatccgctacaagcgcacctgccaggtctgcggcgaggaggtcacctacgacgacatc
gtcaaggggtacgacctcggcggcggtgagctggtcatcctcaccgacgacgacttcgcc
gacctgccactgagcacctcacgggcgatcgacgtgctggagttcgtccccgccgagcag
gtcgatccgattctctacaacaaggcatacttcctcgagccggagggcaccgccaccaag
ccgtacgtgctgctgcgcaacgcgctcaccgactccgaacgggtggccatcgtcaaggtg
gcgatccgccaacgtgagcaactcgcaacgttgcgggtgcaccagggcgtactactgctc
aacacgatgctctggcccgatgagatccggaagcccgagttcggctttctcgacgaggac
ctgaaggtccggcccccggaactggcgatggccagctcactgatcggctcgatggcgggt
gacttccaacccgatgtcttcaccgacgactaccggaccgccctgcaggaggtcatcgac
gcgaaggtggagggccgcgagatcgtccagccggaggaggccgaagaggcgccggcggcg
gcggtggacctgatggcggcgctgaaggcatcggtggagcgggcccaggcggcgcgcggc
gagaagcccgccggtcccggcgcgggcgaaccgaccccgatctcggcggcgcgttccgcc
cagcggaaggccaccgagcagcaggccccgccgaagaaggccaccggcaagaagagcgag
aaggcgactcccgagaagaagaagccagccgagaagaagccagcgaccaagacgaccgcg
aagaagggtgagggaaagcaggcggagccggccaagaagtcgccggcccgcaagggcacc
cgcaagaccgcctga
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