Salinispora tropica: Strop_4269
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Entry
Strop_4269 CDS
T00504
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
stp
Salinispora tropica
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
stp03400
]
Strop_4269
DNA repair and recombination proteins [BR:
stp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Strop_4269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
DnaB_C
DUF7125
ChlI
AAA
NACHT
AAA_22
DUF7129
AAA_16
nSTAND3
AAA_30
NTPase_1
nSTAND_NTPase5
ABC_tran
AAA_29
Lon_C
AAA_14
Diacid_rec
RsgA_GTPase
Rad51
AAA_5
PAXNEB
DZR
Motif
Other DBs
NCBI-ProteinID:
ABP56697
UniProt:
A4XCP0
LinkDB
All DBs
Position
4836441..4837886
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AA seq
481 aa
AA seq
DB search
MTTSRSSRAGATGGRARAAREPRPAYECDACGHQPPKWVGRCPECGEWGSVVECTLTGPT
VSGRVVSSRMPAEPARPIATISAAPARARPTGVSELDRVLGGGLVPGAVVLLAGEPGVGK
STLLLDVAQQWAAGGANPSLVVSGEESVSQVRLRAERMGALHEQLYLAAESDLAAVLGHL
DAVKPGLLVLDSVQTISTTGTEGVPGGVTQVRAVTAALVAVAKERGIATLLVGHVTKDGQ
VAGPRVLEHLVDVVLHFEGDKHSSLRLVRGVKNRFGAADEVGCFEMHEGGISSLADPSGL
FLTRYSEPVPGTCVTVAMEGRRALVTEVQALIGATVAGSPRRTVSGLDSARLAMVLAVLQ
RRTERLTLHDREVFAATVGGIRVVEPAADLAVALAVASGGLNLAITPHLVAIGEVGLTGE
VRRVGAVPRRLAEATRLGFRLALVPPGCGPESTGVRADQLRVIEVSDVRAALQAVAQASA
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacctcccgatcctcccgtgccggcgcgaccggcggccgcgcccgcgctgcccgc
gagccccgccccgcctacgagtgcgacgcctgtggacaccagccaccgaagtgggttggc
cgctgcccggagtgcggcgagtggggttcggtcgtcgagtgcacgctgaccggcccgacc
gtctccggccgggtggtcagttcccggatgccggctgagcccgcgcggccgatcgccacc
atcagcgccgcgcccgcgcgggcccgcccgaccggcgtcagcgaactcgaccgggtgctc
ggcggtggtctggttccgggcgcggtggtgttgctcgccggcgagccgggggtcggcaag
tcgaccctgctactcgacgtggcgcagcagtgggccgccggcggcgccaacccctcgctc
gtggtcagtggcgaggagtcggtcagccaggtccggttgcgcgccgagcggatgggcgcc
ttacacgagcagctctacctggccgccgagagcgacctcgccgcggtgctcgggcacctg
gacgcagtcaagccggggctgctggtgctggattcggtgcagacgatctcgaccaccggc
accgaaggggtgcccggtggggttacccaggttcgcgcggtcaccgcggccctggtggcg
gtcgccaaggagcggggcatcgcgactctgttggtggggcacgtcaccaaggacggccag
gtggccggcccacgggtgttggagcacctggttgacgtggtgctgcacttcgaaggggac
aagcactcgtccctccggttggtgcggggggtgaagaaccggttcggcgcggccgacgag
gtcggctgcttcgagatgcacgagggcggcatcagtagcctggccgacccgtccgggctc
tttctcacccgctactcggagccggtgcccggcacctgcgtcacggtggcgatggagggg
cgacgtgccctggtcaccgaggtgcaggcgctgatcggagcgacggtggccgggtcgcca
cggcggaccgtctccgggctcgactccgcccgactcgccatggttctggcagtgctccaa
cgacgcaccgagcggttgaccctgcacgatcgggaggtcttcgcggccaccgttggcggc
atccgagtcgtcgagcccgccgccgacctggcggtcgccctggcagtcgcttccggcggg
ctcaacctcgcaatcaccccgcacctggtggcgatcggggaggttgggctcaccggcgag
gtgcgccgggtcggggcggtgccacgccggttggccgaggcgacccgactcggcttccgg
ctcgcgctcgtgccaccgggctgcggtccggagagcaccggcgtccgcgctgaccagcta
cgcgtgatcgaggtcagtgatgtccgggccgcgctccaggccgtcgcacaggcttctgcg
gaataa
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