Salinispora tropica: Strop_4277
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Entry
Strop_4277 CDS
T00504
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
stp
Salinispora tropica
Pathway
stp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
stp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Strop_4277
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
stp01007
]
Strop_4277
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
stp03016
]
Strop_4277
Enzymes [BR:
stp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Strop_4277
Amino acid related enzymes [BR:
stp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Strop_4277
Transfer RNA biogenesis [BR:
stp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Strop_4277
Prokaryotic type
Other AARSs
Strop_4277
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
DUF8167_3rd
tRNA-synt_2d
Pyridox_ox_2
Motif
Other DBs
NCBI-ProteinID:
ABP56705
UniProt:
A4XCP8
LinkDB
All DBs
Position
complement(4845769..4847277)
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AA seq
502 aa
AA seq
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MTEQNAVPVDPADDLPEQMKVRREKRDRMLAEGIEPYPLGYPRTRTIAEIRQGYADLPTD
TATGDQVSVTGRVIFMRNTGKLCFATLRDGDGTELQAMLSLDRVGAQRLEDWKRLVDLGD
LVGVTGEVITSRRGELSVLAQGWAVTAKALRPLPVAHKPLSEEARVRQRYVDLIVRPQAR
QMVRTRATAVRSLRESLHERGFLEVETPMLQLLHGGATARPFVTHSNALSTDLYLRIAPE
LFLKRALVGGVDHVFEINRNFRNEGVDSSHSPEFAMLEAYQAYGDYDTIGELTRHLIQQA
ALAVGGSTVVTHADGREFDLGGEWRSVTLFGALSEALGEEVTVRTERTRLVEYADKVDLA
VDPKWGPGKLAEELFEELVVPGLLAPTFVRDYPEETSPLVRAHRTEPGLTEKWDLYVLGF
ELGTGYSELVDPVVQRERLVAQARLAARGDDEAMRLDEDFLRALEYGMPPSGGMGMGIDR
LLMALTGLGIRETILFPLVRPE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgagcagaacgccgtaccagttgaccccgccgacgaccttccggagcagatgaag
gtccgccgggagaagcgggaccggatgctcgccgaggggatcgaaccctatccgcttggg
tatccgcggacccgcacgatcgccgagatccgccaggggtacgccgacctgcccactgac
acggccaccggtgaccaggtgtcggtcaccgggcgggtgatctttatgcggaacaccggc
aagctctgcttcgccacgctgcgggacggcgacggcaccgagctgcaggcgatgctctcc
ctggaccgggtcggcgcgcagcggcttgaggactggaagcggctggtggacctcggtgac
ctcgtcggggtaaccggtgaggtgatcaccagccggcgtggggagctgtcggtgctggcg
caggggtgggcggtcaccgcgaaggcccttcgtccgctgccggtggcgcacaagccgctc
agtgaggaggcccgggtccggcagcgctacgtcgacctcatcgttcgcccgcaggcccgg
cagatggttcgtacccgggcgaccgcggttcgtagcctgcgggagtccctgcacgagcgg
ggcttcctcgaggtggagaccccgatgctgcagctgctgcacggcggtgcgaccgctcgc
ccattcgtgactcacagcaatgcgctcagcaccgatctgtatctacgaatcgctccggaa
ctatttctcaagcgcgcgctcgttggtggcgtagaccacgtcttcgagatcaaccgtaac
ttccgcaatgagggcgttgactcatcgcactcgccggagttcgcgatgctcgaggcttac
caggcgtatggcgactacgacacgatcggcgagttgacccgtcatctcatccagcaggcg
gcgctcgcggtcggcggctcgacggtggtgacccacgcggacggtcgtgagttcgacctc
ggcggtgagtggcgttcggtgacgctgttcggtgccctttccgaagcgctcggagaggag
gtcacggtacgcacggagcggacccgtctggtcgagtacgcggacaaggtggacttggcg
gtcgacccgaagtggggtccgggcaagctggccgaggaactgttcgaggagttggtcgtc
ccgggtctgctggcgcccaccttcgtgcgggactatcccgaggagaccagcccgttggtc
cgggcgcaccgcaccgagccgggcctgaccgagaagtgggacctctacgtactcggcttc
gaactgggtacgggctactccgagttggtggatccggtggttcagcgggagcgtctggtg
gcccaggcgcggctcgcggcgcggggcgacgacgaggcgatgcggctcgacgaggacttt
ctccgggccctggagtacggaatgccaccgtctggtggtatgggaatgggaatcgaccgg
ctgctcatggcgctgaccggcctgggaattcgggaaaccatcctcttcccgctggtccga
cccgagtga
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