Streptomyces sp. PBH53: QR97_01545
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Entry
QR97_01545 CDS
T10303
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
stpb Streptomyces sp. PBH53
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stpb03021
]
QR97_01545
Transcription machinery [BR:
stpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QR97_01545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
PF0610-like_N
HTH_23
Sigma70_ECF
DUF7343
MarR_2
NirdL-like_HTH
HTH_24
IF2_N
MarR
HTH_3
HTH_Crp_2
GerE
HTH_AraC
HTH_ParB
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AKN75072
LinkDB
All DBs
Position
375709..376698
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AA seq
329 aa
AA seq
DB search
MDGIPEQARPHPEDDSARASGDDAGQGTPPEAGDGAGTAVRAGARARGRATGGTMSEHER
HAEDDTPATEAVQAVRHDAQDRSGARAMFIELRTLREGSAEYAELRNQLVRMHLPLVEHL
ARRFRNRGEPLDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAV
RVPRRLQELRLSLTTATAELSQLHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLD
VPDTDDESPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIA
QEVGISQMHVSRLLARTLAQLREKLLVEE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atcgacggcatccccgagcaggccaggccgcacccggaggacgactccgcgcgtgcctcc
ggtgacgatgccggccagggcacgccaccggaggccggcgacggcgccggaaccgccgtc
cgcgcgggtgcgagggctcggggaagggcaacgggcgggacgatgagcgagcacgagcga
cacgccgaggacgacacgccggccacggaagccgtgcaggccgtacggcacgacgcccag
gaccgcagcggggcgcgggcgatgttcatcgaactgcgcacgctgcgggaaggcagcgcg
gagtacgcggagctgcgcaaccagctggtccgcatgcacctgccgctcgtggagcacctg
gcgcgccgcttccgcaaccgcggcgagccgctggacgacctcacccaggtcgccacgatc
ggtctgatcaagtccgtcgaccggttcgaccccgagcgcggcgtggagttctcgacgtac
gccaccccgaccgtcgtcggcgagatcaagcggcacttccgcgacaagggctgggcggtc
cgggtgccgcgccggcttcaggagctgcggctgtcgctgaccaccgccacggccgagctg
tcccagctgcacggccggtccccgacggtccacgagctggcggagaagctcgccatctcg
gaggaggaggtcctggagggcctggagtccgcgaacgcgtactccacgctgtccctggac
gtccccgacacggacgacgagtcgccggcggtcgccgacaccctgggcgccgaggacgag
gcgctggagggcgtggagtaccgcgagtccctgaagccgctgctggaggacctgccgccg
cgcgagaagcggatcctgctgctgcgcttcttcgggaacatgacccagtcgcagatcgcg
caggaggtcggcatctcccagatgcacgtctcccgcctgctggcccgcaccctggcccag
ctgcgggagaagctcctcgtcgaggagtag
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