Streptomyces sp. PBH53: QR97_03585
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Entry
QR97_03585 CDS
T10303
Name
(GenBank) RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
stpb Streptomyces sp. PBH53
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
stpb03021
]
QR97_03585
Transcription machinery [BR:
stpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QR97_03585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
MarR
DUF7343
Motif
Other DBs
NCBI-ProteinID:
AKN69015
LinkDB
All DBs
Position
835173..836114
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AA seq
313 aa
AA seq
DB search
MSADQGSSKVLTPTMSEAAPKELDALDVLDGFEGVTALEAVPSPAEGPAAEAVPAAQATA
NIDTRTLSRSLFLRLAALGEDSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQV
GTIGLIKAIDRFDCERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKAS
DELSQKLDRSPTVTELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRL
GYEDSALEGVEYRESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLT
RTLAQLRDGLISD
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaccagggcagctcgaaggtgctgacgcccacgatgagcgaggcagcgccc
aaggagctcgacgctctcgacgtcctcgacggcttcgagggtgtcacggccctcgaagcc
gtgccgtccccggccgaaggcccggccgccgaagctgtcccggccgcgcaggccacggcg
aacatcgacacccgcaccctgtcccgctcgctgttcctgcgcctggccgcgctgggcgag
gacagccccgagcgggcctacgtgcgggacaccctgatcgagctgaacctgccgctggtc
cgctacgcggcggcgcgtttccgctcccgcaacgagccgatggaggacatcgtccaggtc
ggcaccatcggcctgatcaaggcgatcgaccggttcgactgcgaacggggcgtggagttc
ccgacgttcgcgatgccgacggtcgtgggcgagatcaagcggttcttccgggacacctcg
tggtccgtgcgcgtcccgcgccggctccaggaactgcgcctggcgctcaccaaggccagc
gacgagctgtcgcagaagctggaccgctcccccacggtgaccgagctggccgccgtgctc
ggcgtctccgaggaggacgtggtcgacggcctcgcggtcggcaacgcctacaccgcctcc
tccctcgactcgccggcccccgaggacgacggcggcgagggttccctggccgaccggctc
ggctacgaggactcggccctggagggcgtggagtaccgcgagtccctcaagcccctgctg
gccaaactcccgccccgggagcggcggatcatcatgctccgcttcttcgccaacatgacg
cagtcacagatcggcgaggaggtcggcatctcccagatgcacgtctcccgcctgctgacc
cggacgctggcgcagctgcgggacggtctgatctcggactga
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