Streptomyces sp. PBH53: QR97_05680
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Entry
QR97_05680 CDS
T10303
Symbol
groEL
Name
(GenBank) molecular chaperone GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QR97_05680 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stpb03019
]
QR97_05680 (groEL)
03110 Chaperones and folding catalysts [BR:
stpb03110
]
QR97_05680 (groEL)
03029 Mitochondrial biogenesis [BR:
stpb03029
]
QR97_05680 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
stpb04147
]
QR97_05680 (groEL)
Enzymes [BR:
stpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
QR97_05680 (groEL)
Messenger RNA biogenesis [BR:
stpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
QR97_05680 (groEL)
Chaperones and folding catalysts [BR:
stpb03110
]
Heat shock proteins
HSP60 / Chaperonin
QR97_05680 (groEL)
Mitochondrial biogenesis [BR:
stpb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
QR97_05680 (groEL)
Exosome [BR:
stpb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
QR97_05680 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
QR97_05680 (groEL)
Exosomal proteins of breast cancer cells
QR97_05680 (groEL)
Exosomal proteins of colorectal cancer cells
QR97_05680 (groEL)
Exosomal proteins of bladder cancer cells
QR97_05680 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
AKN69380
UniProt:
A0A0H4BXP0
LinkDB
All DBs
Position
complement(1300464..1302092)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
IEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPAALKKGID
AAVKAVSEDLLASARPIDEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLEDPYILINQGKISAIADLLPLLEKVIQ
AGSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMAVLTGATV
ISEEVGLKLDQVGIDVLGSARRVTVTKDDTTIVDGAGKSEDVQGRVAQIKAEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HASKVLEGNLDKAGDEATGVAVVRNAVVEPLRWIGENAGQEGYVIVSKVKDLEKGQGYNA
ATGEYGDLIKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEPEAAGHGHSHGH
AH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgcccttgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgctcccaccatcaccaacgacggtgtcacgatcgcccgcgaggtcgag
atcgaggacccgtacgagaacctcggcgctcagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccacggtcctcgcccaggcgctggtccgc
gagggtctgaagaacgtcgccgccggtgcctccccggccgccctgaagaagggcatcgac
gccgcggtcaaggccgtctccgaggacctgctcgcctcggcccgcccgatcgacgagaag
tccgacatcgccgccgtcgccgcgctgtccgcccaggaccagcaggtcggcgagctgatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtctggagctggacttcaccgagggcatggccttcgacaagggctacctgtcgccg
tacttcgtgacggaccaggagcgcatggaggccgtcctggaggacccgtacatcctcatc
aaccagggcaagatctccgccatcgccgacctgctgccgctgctggagaaggtcatccag
gccggctcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtcaacaagatccgcggcaccttcaacgccgtcgcggtgaaggccccgggc
ttcggcgaccgccgcaaggcgatgctccaggacatggccgtcctcaccggcgccaccgtc
atctccgaggaggtcggcctcaagctcgaccaggtcggcatcgacgtgctcggctccgcc
cgccgtgtcaccgtcaccaaggacgacaccaccatcgtcgacggtgccggcaagtccgag
gacgtgcagggccgcgtcgcgcagatcaaggccgagatcgagaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgctctggtc
cacgcctccaaggtcctcgagggcaacctcgacaaggccggcgacgaggccaccggtgtc
gccgtcgtccgcaacgccgtggtcgagccgctgcgctggatcggcgagaacgccggccag
gagggctacgtcatcgtctccaaggtcaaggacctggagaaggggcagggctacaacgcc
gccaccggcgagtacggcgacctgatcaaggccggcgtcatcgacccggtcaaggtcacc
cgctccgccctggagaacgccgcctccatcgcctccctgctgctcacgaccgagaccctg
gtcgtcgagaagaaggaagaggaaccggaggccgcgggccacggccacagccacggccac
gcccactga
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