Streptomyces sp. PBH53: QR97_07005
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Entry
QR97_07005 CDS
T10303
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
stpb Streptomyces sp. PBH53
Pathway
stpb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
stpb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
QR97_07005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
stpb03019
]
QR97_07005
03009 Ribosome biogenesis [BR:
stpb03009
]
QR97_07005
Messenger RNA biogenesis [BR:
stpb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QR97_07005
Ribosome biogenesis [BR:
stpb03009
]
Eukaryotic type
Pre-60S particles
RNases
QR97_07005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKN69615
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All DBs
Position
1588664..1589266
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AA seq
200 aa
AA seq
DB search
MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPARALETMPEVVR
QMHTASGLLAELESGTTLQDAEEQVLAYVREHVKEPGKAPLCGNSVGTDRGFLLRDMPTL
EDYLHYRIVDVSSIKELARRWYPRAYFNSPEKNGNHRALADIRESIAELRYYREAIFVPQ
PGPDSDTAKSIAAKHVLPAQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtccgacgac
gctctcatcgaggtggccgccctcgtcaccgactccgagctgaacgtgctgggcgaaggg
gtggacatcgtcatccgcccgccggcccgcgcgctggagacgatgccggaggtggtgcgt
cagatgcacaccgcgtccgggctgctcgccgagctggagagcggtacgaccctccaggac
gccgaggagcaggtcctcgcctatgtccgggagcacgtgaaggagcccggcaaggccccg
ctgtgcggcaactccgtcggcaccgaccgcggcttcctgctgcgcgacatgccgaccctg
gaggactacctccactaccggatcgtcgacgtgtcctcgatcaaggagctggcccgccgc
tggtacccgcgggcgtacttcaacagcccggagaagaacggcaaccaccgggccctcgcc
gacatccgcgagtcgatcgccgagctgcgctactaccgcgaggccatcttcgtgccgcag
cccggccccgactccgacaccgcgaagtcgatcgccgccaagcacgtgctgcccgcgcag
tag
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