KEGG   Streptomyces sp. PBH53: QR97_17435
Entry
QR97_17435        CDS       T10303                                 
Name
(GenBank) integration host factor
  KO
K03530  DNA-binding protein HU-beta
Organism
stpb  Streptomyces sp. PBH53
Brite
KEGG Orthology (KO) [BR:stpb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:stpb03032]
    QR97_17435
   03036 Chromosome and associated proteins [BR:stpb03036]
    QR97_17435
   03400 DNA repair and recombination proteins [BR:stpb03400]
    QR97_17435
DNA replication proteins [BR:stpb03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    QR97_17435
Chromosome and associated proteins [BR:stpb03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    QR97_17435
DNA repair and recombination proteins [BR:stpb03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      QR97_17435
SSDB
Motif
Pfam: Bac_DNA_binding Urease_beta DUF7342 HU-HIG
Other DBs
NCBI-ProteinID: AKN71350
UniProt: A0A0H4C3D3
LinkDB
Position
4006499..4006780
AA seq 93 aa
MNRSELVAALADRAEVTRKDADAVLAAFAETVGEIVAKGDEKVTIPGFLTFERTHRAART
ARNPQTGEPINIPAGFSVKVTAGSKLKEAAKGK
NT seq 282 nt   +upstreamnt  +downstreamnt
atgaaccgcagtgagctggtggccgcgctggccgaccgcgccgaggtgacccgcaaggac
gccgacgccgtgctggccgcgttcgccgagaccgtcggcgagatcgtcgccaagggcgac
gagaaggtcaccatccccggcttcctgaccttcgagcgcacccaccgtgccgctcgcacc
gcgcgcaacccgcagaccggcgagcccatcaacatcccggccggcttcagcgtgaaggtc
accgcgggcagcaagctcaaggaagccgccaagggcaagtaa

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